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README.md
README.md
 
 
append.umi.to.read.name.rb
append.umi.to.read.name.rb
 
 
ara11.collapse.genes.R
ara11.collapse.genes.R
 
 
arabidopsis.mapping.batch.multimap.STAR.sh
arabidopsis.mapping.batch.multimap.STAR.sh
 
 
distance.to.nearest.R
distance.to.nearest.R
 
 
fit.coordinates.R
fit.coordinates.R
 
 
fix.incomplete.lines.solid.rb
fix.incomplete.lines.solid.rb
 
 
gff.to.gtf.R
gff.to.gtf.R
 
 
multiline.to.single.line.fasta.stdinout.rb
multiline.to.single.line.fasta.stdinout.rb
 
 
replace.methylation.rb
replace.methylation.rb
 
 
separate.transcripts.rb
separate.transcripts.rb
 
 
solid.csfa.and.qual.to.csfastq.v2.rb
solid.csfa.and.qual.to.csfastq.v2.rb
 
 
sra.fasterq.dump.sh
sra.fasterq.dump.sh
 
 
summarize.counts.n.stats.R
summarize.counts.n.stats.R
 
 
transcript.fa.from.annotation.and.genome.R
transcript.fa.from.annotation.and.genome.R
 
 
which.quantile.R
which.quantile.R
 
 

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handy_scripts

small scripts for common tasks I have found annoying myself, mostly in R. This is intended for personal use, but if you happen to be reading this, do not hesitate to comunicate any doubt or comment.

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small scripts for common tasks

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