Fix docker builds, sanitise fasta headers, traveler update #80
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| name: Build and Push Base Docker image | |
| on: | |
| pull_request: | |
| paths: | |
| - 'base_image/**' | |
| - '.github/workflows/base-image.yml' | |
| jobs: | |
| build: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Checkout code | |
| uses: actions/checkout@v4 | |
| - name: Set up QEMU | |
| uses: docker/setup-qemu-action@v3 | |
| - name: Set up Docker Buildx | |
| uses: docker/setup-buildx-action@v3 | |
| - name: Log in to DockerHub | |
| uses: docker/login-action@v3 | |
| with: | |
| username: ${{ secrets.DOCKER_USER }} | |
| password: ${{ secrets.DOCKER_PASSWORD }} | |
| - name: Docker Meta | |
| id: docker_meta | |
| uses: docker/metadata-action@v4 | |
| with: | |
| images: rnacentral/r2dt-base | |
| flavor: latest=false | |
| tags: | | |
| type=ref,event=pr | |
| - name: Calculate Dockerfile hash | |
| id: dockerfile_hash | |
| run: echo "hash=$(sha256sum base_image/Dockerfile | cut -d' ' -f1)" >> $GITHUB_OUTPUT | |
| - name: Build and push Docker image | |
| id: build | |
| uses: docker/build-push-action@v6 | |
| with: | |
| platforms: linux/amd64,linux/arm64 | |
| push: true | |
| labels: ${{ steps.docker_meta.outputs.labels }} | |
| tags: ${{ steps.docker_meta.outputs.tags }} | |
| cache-from: type=registry,ref=rnacentral/r2dt-base:cache-${{ steps.dockerfile_hash.outputs.hash }} | |
| cache-to: type=registry,ref=rnacentral/r2dt-base:cache-${{ steps.dockerfile_hash.outputs.hash }},mode=max | |
| file: base_image/Dockerfile | |
| context: base_image/ |