Local use of rhub/fedora-clang-devel fails with BioConductor

[eddelbuettel]

Started as local_check_linux("mylocalpackage_1.2.3.tar.gz", image="rhub/fedora-clang-devel")

Starts out well enough updating F31 but then

>>>>>==================== Starting Docker container
8ab7d6d4e14eeb6f0d8bb5c3de74e223ecea43dd89228310b72fb260f034b187
> source('https://bioconductor.org/biocLite.R')
Error: With R version 3.5 or greater, install Bioconductor packages using BiocManager; see https://bioconductor.org/install
Execution halted
Error in run(bash, c(file.path(wd, "rhub-linux.sh"), args), echo = TRUE,  : 
  System command 'bash' failed, exit status: 1, stdout & stderr were printed
Type .Last.error.trace to see where the error occured
R> 

[eddelbuettel]

Worse, it fails even when I have zero BioC Suggests. That is ... pretty bad.

[eddelbuettel]

And joy oh joy it is the same for rhub/debian-clang-devel so I just wasted two containers downloads. Well it looked like a nice idea at the time.

[gaborcsardi]

Duplicate of #390

[eddelbuettel]

Sorry. I made two searches for BioConductor but did not find anything. Odd I missed that one. I tried, and failed. :-/

So when will you update the (clearly identified as broken) CRAN version?

[gaborcsardi]

This issue is about the previous R-hub system, it does not apply to the new system, so I am closing it now. Please see https://r-hub.github.io/rhub/ for the new system, R-hub v2.