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@qbic-projects

QBiC

Quantitative Biology Center, University of Tübingen

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  1. r-project-template r-project-template Public template

    R project template

    HTML 2 2

  2. QSARK QSARK Public

    Data analysis for sarek paper

    PostScript 2

  3. MetaAnalyzer MetaAnalyzer Public

    MetaAnalyzer is a tool to analyze and aggregate human-derived metadata of the metadata schemes for the DZIF microbial OMICs database.

    JavaScript 1 1

  4. Microbial-OMICs Microbial-OMICs Public

    Metadata schemes implemented in LinkML for the DZIF microbial OMICs database plus building scripts for the DZIF DataHarmonizer.

    Python 1 1

  5. DZIFDataHarmonizer DZIFDataHarmonizer Public

    Forked from cidgoh/DataHarmonizer

    JavaScript 1 1

  6. sarek-QSTHO sarek-QSTHO Public

    Forked from nf-core/sarek

    Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing

    Nextflow

Repositories

Showing 10 of 15 repositories
  • BIOPM_helper_scripts Public

    Small helper scripts for data transformation and analysis

    qbic-projects/BIOPM_helper_scripts’s past year of commit activity
    Python 0 1 0 0 Updated Oct 11, 2024
  • MetaAnalyzer Public

    MetaAnalyzer is a tool to analyze and aggregate human-derived metadata of the metadata schemes for the DZIF microbial OMICs database.

    qbic-projects/MetaAnalyzer’s past year of commit activity
    JavaScript 1 MIT 1 0 0 Updated Sep 6, 2024
  • Microbial-OMICs Public

    Metadata schemes implemented in LinkML for the DZIF microbial OMICs database plus building scripts for the DZIF DataHarmonizer.

    qbic-projects/Microbial-OMICs’s past year of commit activity
    Python 1 MIT 1 0 0 Updated Sep 3, 2024
  • qbic-projects/DZIFDataHarmonizer’s past year of commit activity
    JavaScript 1 MIT 28 0 0 Updated Sep 3, 2024
  • QOOBR Public Forked from qbic-projects/MS-cladribine-study

    Data analysis QOOBR

    qbic-projects/QOOBR’s past year of commit activity
    HTML 0 4 0 0 Updated May 20, 2024
  • nanoseq-qxstt Public Forked from LaurenceKuhl/nanoseq

    Nanopore demultiplexing, QC and alignment pipeline

    qbic-projects/nanoseq-qxstt’s past year of commit activity
    Nextflow 0 MIT 83 0 1 Updated May 17, 2024
  • QSARK Public

    Data analysis for sarek paper

    qbic-projects/QSARK’s past year of commit activity
    PostScript 2 MIT 0 0 0 Updated Feb 16, 2024
  • rnaseq-benchmark Public

    Comparison of the output of different versions of the nf-core/rnaseq pipeline for 3 datasets containing ERCC spike-ins

    qbic-projects/rnaseq-benchmark’s past year of commit activity
    HTML 0 MIT 0 0 0 Updated Dec 18, 2023
  • MS-cladribine-study Public Forked from ggabernet/MS-cladribine-study

    Data analysis QMKMK-clad

    qbic-projects/MS-cladribine-study’s past year of commit activity
    HTML 0 4 0 0 Updated Oct 10, 2023
  • qfendcnv Public
    qbic-projects/qfendcnv’s past year of commit activity
    Nextflow 0 MIT 0 0 0 Updated Sep 4, 2023

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