-
-
Notifications
You must be signed in to change notification settings - Fork 2.1k
New issue
Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.
By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.
Already on GitHub? Sign in to your account
Add graphviz support for SymbolicRVs #6149
Closed
Closed
Conversation
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
cdf7752
to
f5d48d2
Compare
Codecov Report
Additional details and impacted files@@ Coverage Diff @@
## main #6149 +/- ##
==========================================
+ Coverage 88.84% 89.60% +0.76%
==========================================
Files 101 101
Lines 22235 22264 +29
==========================================
+ Hits 19755 19950 +195
+ Misses 2480 2314 -166
|
ricardoV94
reviewed
Sep 27, 2022
4444fd8
to
3bd3898
Compare
3bd3898
to
c88664c
Compare
Check out this pull request on See visual diffs & provide feedback on Jupyter Notebooks. Powered by ReviewNB |
ef7d518
to
20cfc98
Compare
Closed in favor of a new PR that will use a dispatching approach |
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.
This suggestion is invalid because no changes were made to the code.
Suggestions cannot be applied while the pull request is closed.
Suggestions cannot be applied while viewing a subset of changes.
Only one suggestion per line can be applied in a batch.
Add this suggestion to a batch that can be applied as a single commit.
Applying suggestions on deleted lines is not supported.
You must change the existing code in this line in order to create a valid suggestion.
Outdated suggestions cannot be applied.
This suggestion has been applied or marked resolved.
Suggestions cannot be applied from pending reviews.
Suggestions cannot be applied on multi-line comments.
Suggestions cannot be applied while the pull request is queued to merge.
Suggestion cannot be applied right now. Please check back later.
Closes #5766.
Prior to this PR, symbolic distributions were labelled as "Deterministic" in the graph produced by Graphviz. The recent addition of symbolic RVs in #6072 allows
pymc/model_graph.py
to be adapted more easily. Here is an example of what is obtained using symbolic distributions such aspm.Mixture
,pm.Censored
,pm.ZeroInflatedPoisson
.Tests in
pymc/tests/test_model_graph.py
checks that the arrows are pointing to and from the right variables and that the overall shape of the Graphviz Digraph is correct. Perhaps an additional check that the distribution names are correct can be added, because this is what this PR is about.