Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Feature/to dict encoding #6635

Merged
merged 5 commits into from
May 26, 2022
Merged
Show file tree
Hide file tree
Changes from 1 commit
Commits
File filter

Filter by extension

Filter by extension

Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
10 changes: 9 additions & 1 deletion xarray/core/dataarray.py
Original file line number Diff line number Diff line change
Expand Up @@ -3067,7 +3067,7 @@ def to_netcdf(
invalid_netcdf=invalid_netcdf,
)

def to_dict(self, data: bool = True) -> dict:
def to_dict(self, data: bool = True, encoding: bool = False) -> dict:
"""
Convert this xarray.DataArray into a dictionary following xarray
naming conventions.
Expand All @@ -3081,15 +3081,20 @@ def to_dict(self, data: bool = True) -> dict:
data : bool, optional
Whether to include the actual data in the dictionary. When set to
False, returns just the schema.
encoding : bool, optional
Whether to include the Dataset's encoding in the dictionary.

See Also
--------
DataArray.from_dict
Dataset.to_dict
"""
d = self.variable.to_dict(data=data)
d.update({"coords": {}, "name": self.name})
for k in self.coords:
d["coords"][k] = self.coords[k].variable.to_dict(data=data)
if encoding:
d["encoding"] = dict(self.encoding)
return d

@classmethod
Expand Down Expand Up @@ -3155,6 +3160,9 @@ def from_dict(cls, d: dict) -> DataArray:
raise ValueError("cannot convert dict without the key 'data''")
else:
obj = cls(data, coords, d.get("dims"), d.get("name"), d.get("attrs"))

obj.encoding.update(d.get("encoding", {}))

return obj

@classmethod
Expand Down
20 changes: 17 additions & 3 deletions xarray/core/dataset.py
Original file line number Diff line number Diff line change
Expand Up @@ -5944,7 +5944,7 @@ def to_dask_dataframe(self, dim_order=None, set_index=False):

return df

def to_dict(self, data=True):
def to_dict(self, data: bool = True, encoding: bool = False) -> dict:
"""
Convert this dataset to a dictionary following xarray naming
conventions.
Expand All @@ -5958,10 +5958,17 @@ def to_dict(self, data=True):
data : bool, optional
Whether to include the actual data in the dictionary. When set to
False, returns just the schema.
encoding : bool, optional
Whether to include the Dataset's encoding in the dictionary.

Returns
-------
d : dict

See Also
--------
Dataset.from_dict
DataArray.to_dict
"""
d = {
"coords": {},
Expand All @@ -5970,9 +5977,15 @@ def to_dict(self, data=True):
"data_vars": {},
}
for k in self.coords:
d["coords"].update({k: self[k].variable.to_dict(data=data)})
d["coords"].update(
{k: self[k].variable.to_dict(data=data, encoding=encoding)}
)
for k in self.data_vars:
d["data_vars"].update({k: self[k].variable.to_dict(data=data)})
d["data_vars"].update(
{k: self[k].variable.to_dict(data=data, encoding=encoding)}
)
if encoding:
d["encoding"] = dict(self.encoidng)
jhamman marked this conversation as resolved.
Show resolved Hide resolved
return d

@classmethod
Expand Down Expand Up @@ -6061,6 +6074,7 @@ def from_dict(cls, d):
obj = obj.set_coords(coords)

obj.attrs.update(d.get("attrs", {}))
obj.encoding.update(d.get("encoding", {}))

return obj

Expand Down
6 changes: 5 additions & 1 deletion xarray/core/variable.py
Original file line number Diff line number Diff line change
Expand Up @@ -533,13 +533,17 @@ def to_index(self):
"""Convert this variable to a pandas.Index"""
return self.to_index_variable().to_index()

def to_dict(self, data=True):
def to_dict(self, data: bool = True, encoding: bool = False) -> dict:
"""Dictionary representation of variable."""
item = {"dims": self.dims, "attrs": decode_numpy_dict_values(self.attrs)}
if data:
item["data"] = ensure_us_time_resolution(self.values).tolist()
else:
item.update({"dtype": str(self.dtype), "shape": self.shape})

if encoding:
item["encoding"] = dict(self.encoding)

return item

@property
Expand Down
10 changes: 7 additions & 3 deletions xarray/tests/test_dataarray.py
Original file line number Diff line number Diff line change
Expand Up @@ -3140,18 +3140,22 @@ def test_series_categorical_index(self):
arr = DataArray(s)
assert "'a'" in repr(arr) # should not error

def test_to_and_from_dict(self):
@pytest.mark.parametrize("encoding", [True, False])
def test_to_and_from_dict(self, encoding):
jhamman marked this conversation as resolved.
Show resolved Hide resolved
array = DataArray(
np.random.randn(2, 3), {"x": ["a", "b"]}, ["x", "y"], name="foo"
)
array.encoding = {"bar": "spam"}
expected = {
"name": "foo",
"dims": ("x", "y"),
"data": array.values.tolist(),
"attrs": {},
"coords": {"x": {"dims": ("x",), "data": ["a", "b"], "attrs": {}}},
}
actual = array.to_dict()
if encoding:
expected["encoding"] = {"bar": "spam"}
actual = array.to_dict(encoding=encoding)

# check that they are identical
assert expected == actual
Expand Down Expand Up @@ -3198,7 +3202,7 @@ def test_to_and_from_dict(self):
endiantype = "<U1" if sys.byteorder == "little" else ">U1"
expected_no_data["coords"]["x"].update({"dtype": endiantype, "shape": (2,)})
expected_no_data.update({"dtype": "float64", "shape": (2, 3)})
actual_no_data = array.to_dict(data=False)
actual_no_data = array.to_dict(data=False, encoding=encoding)
assert expected_no_data == actual_no_data

def test_to_and_from_dict_with_time_dim(self):
Expand Down