update bcr-phylo + dockerfile

psathyrella · Mar 9, 2024 · b3e578d · b3e578d
1 parent 9ae6a27
commit b3e578d
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diff --git a/Dockerfile b/Dockerfile
@@ -27,7 +27,7 @@ ARG MAMBA_DOCKERFILE_ACTIVATE=1
 RUN micromamba install -y -c conda-forge -c bioconda -cbiocore -c etetoolkit \
     python biopython pandas psutil pysam scons seaborn zlib pyyaml scikit-learn \
     mafft circlify ete3
-RUN pip install colored-traceback dendropy levenshtein
+RUN pip install colored-traceback dendropy joypy levenshtein
 ENV XDG_RUNTIME_DIR=/tmp/xdgrd
 RUN mkdir $XDG_RUNTIME_DIR
 RUN chmod 0700 $XDG_RUNTIME_DIR

diff --git a/packages/bcr-phylo-benchmark b/packages/bcr-phylo-benchmark