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Issues: privefl/bigsnpr

Installation issue: OS X "-lgfortran" and "-lquadmath" errors
#6 by DrK-Lo was closed Sep 13, 2018
Closed 5
Handling missing values in SNP matrix
#49 by naglemi was closed Mar 9, 2020
Closed 13
African LD reference
#305 by rameez500 was closed Mar 1, 2022
Closed 5
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34 Open 457 Closed
34 Open 457 Closed
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Issues list

bed_autoSVD PC number calculation error?
#530 opened Dec 25, 2024 by gradsmjin814
3
Reasoning behind matching of IDs #1
#529 opened Dec 18, 2024 by scienception
1
Question on computing PGS from beta_auto and G
#528 opened Dec 18, 2024 by scienception
2
Chromosome 6 issues
#526 opened Dec 16, 2024 by Sabor117
14
Use of the pre-computed LD matrices
#525 opened Dec 12, 2024 by SalemWerdyani
3
Use the genotype matrix for another library
#522 opened Nov 19, 2024 by garyzhubc
4
Data file format
#519 opened Oct 27, 2024 by vdvornyk1
3
LD Metrics Using 1000 Genomes and Beta Values Returning NA
#518 opened Oct 23, 2024 by Taewoong-Ha
4
Some failures in tests [ FAIL 13 | WARN 0 | SKIP 1 | PASS 174 ]
#515 opened Sep 21, 2024 by barracuda156
5
How to get sample ids out of a bigsnpr object?
#514 opened Aug 22, 2024 by garyzhubc
1
Issue with the loop in the code
#513 opened Aug 1, 2024 by khujithrajueni
3
How to deal "missing value error" on imputed genotypes data
#511 opened Jul 30, 2024 by panqinglzmc
7
About the INFO value in Quality Control of GWAS summary statistics
#509 opened Jul 25, 2024 by koujiaodahan
2
how to handle ldsc with negative h2 value?
#506 opened Jul 5, 2024 by SangGold
2
Should error when using a correlation matrix with NA / NaNs values enhancement good for first PR
#498 opened May 22, 2024 by privefl
Error in step #3 of projecting PC scores on new data
#496 opened Apr 30, 2024 by ozandikilitas
16
Handle insertions/deletions coded as I/D in snp_match() enhancement
#494 opened Apr 18, 2024 by privefl
2
Would it be possible to release 1.12.6?
#493 opened Apr 16, 2024 by stefcardinale
1
Imputation for haploid organisms
#485 opened Mar 18, 2024 by adomron24
2
How to get the avaliable snp list with corrected beta used in LDpred2-auto module
#481 opened Feb 29, 2024 by koujiaodahan
2
LDpred2-auto for EWAS
#473 opened Jan 15, 2024 by KristofferSandas
33
See if could make snp_colstats() faster
#470 opened Dec 20, 2023 by privefl
Using bigsnpr C++ headers in my package good for first PR
#460 opened Nov 1, 2023 by kristjanmoore
5
Unusually High h2est Values: Exceeding 1 and Reaching up to 2 or 3
#420 opened Apr 12, 2023 by PEWilliamZhou
27
Simulating multiple genetically correlated phenotypes feature request
#419 opened Apr 10, 2023 by fmorgante
7
ProTip! What’s not been updated in a month: updated:<2024-11-27.