Automatic creation of .deb packages

.github/workflows/ubuntu_build.yml

@@ -0,0 +1,63 @@
+name: Calculix 2.17 with preCICE adapter test build
+
+on: [push, pull_request]
+
+jobs:
+  build:
+
+    strategy:
+      matrix:
+        os: [ubuntu-18.04, ubuntu-20.04]
+        include:
+          - os: ubuntu-18.04
+            name: bionic
+          - os: ubuntu-20.04
+            name: focal
+    runs-on: ${{matrix.os}}
+    continue-on-error: true
+    env: # Versioning is "calculix-preciceX_2.YY-Z[...]" with X the major preCICE version, YY the minor CCX version and Z the package version
+      PACKAGE_NAME: "calculix-precice2_2.17-1_amd64"
+
+    steps:
+    - name: Update system
+      run: sudo apt update && sudo apt upgrade -y
+    - uses: actions/checkout@v2
+      with:
+        ref: ${{ github.ref }}
+    - name: Get preCICE v2.3.0
+      run: wget https://github.com/precice/precice/releases/download/v2.3.0/libprecice2_2.3.0_${{matrix.name}}.deb &&
+        sudo apt install ./libprecice2_2.3.0_${{matrix.name}}.deb -y
+    - name: install dependencies
+      run: sudo apt install libarpack2-dev libspooles-dev libyaml-cpp-dev -y
+    - name: Download CalculiX
+      run: wget http://www.dhondt.de/ccx_2.17.src.tar.bz2
+    - name: Unpack Calculix
+      run: tar -xjf ccx_2.17.src.tar.bz2
+    - run: echo "CCX=$(pwd)/CalculiX/ccx_2.17/src" >> $GITHUB_ENV
+    - name: Show paths
+      run: echo "${{env.CCX}}" && ls "${{env.CCX}}"
+    - name: make
+      run: make -j 4 CCX="./CalculiX/ccx_2.17/src"
+    - name: Test run
+      run: ./bin/ccx_preCICE -h
+    - name: Download tools for packaging
+      run: sudo apt install lintian pandoc -y
+    - name: Create Debian Package
+      run: |
+        mkdir -p "packaging/calculix-precice2_2.17-1_amd64/usr/bin" &&
+        cp ./bin/ccx_preCICE ./packaging/calculix-precice2_2.17-1_amd64/usr/bin/ccx_preCICE &&
+        cd packaging && pwd && bash ./make_deb.sh ${{matrix.name}}
+    - name: Store Debian package artifact
+      uses: actions/upload-artifact@v2
+      with:
+        name: "${{env.PACKAGE_NAME}}_${{matrix.name}}.deb"
+        path: "packaging/${{env.PACKAGE_NAME}}_${{matrix.name}}.deb"
+    - name: Compute SHA256 checksum
+      run: sha256sum "packaging/${{env.PACKAGE_NAME}}_${{matrix.name}}.deb" > "packaging/${{env.PACKAGE_NAME}}_${{matrix.name}}.deb.sha256"
+    - name: Store SHA256 checksum as artifact
+      uses: actions/upload-artifact@v2
+      with:
+        name: "${{env.PACKAGE_NAME}}_${{matrix.name}}.deb.sha256"
+        path: "packaging/${{env.PACKAGE_NAME}}_${{matrix.name}}.deb.sha256"
+    - name: Inspect package with lintian
+      run: sudo apt install lintian -y && lintian ./packaging/${{env.PACKAGE_NAME}}_${{matrix.name}}.deb

Makefile

@@ -2,13 +2,23 @@
 # https://github.com/precice/calculix-adapter/wiki/Installation-instructions-for-CalculiX
 # Set the following variables before building:
 # Path to original CalculiX source (e.g. $(HOME)/ccx_2.16/src )
-CCX             = $(HOME)/PathTo/CalculiX/ccx_2.16/src
-# Path to SPOOLES main directory (e.g. $(HOME)/SPOOLES.2.2 )
-SPOOLES         = $(HOME)/PathTo/SPOOLES
-# Path to ARPACK main directory (e.g. $(HOME)/ARPACK )
-ARPACK          = $(HOME)/PathTo/ARPACK
-# Path to yaml-cpp prefix (e.g. $(HOME)/yaml-cpp, should contain "include" and "build")
-YAML            = $(HOME)/PathTo/yaml-cpp
+CCX             = $(HOME)/CalculiX/ccx_2.17/src
+
+### Change these if you built SPOOLES, ARPACK, or yaml-cpp from source ###
+# SPOOLES include flags (e.g. -I$(HOME)/SPOOLES.2.2 )
+SPOOLES_INCLUDE   = -I/usr/include/spooles/
+# SPOOLES library flags (e.g. $(HOME)/SPOOLES.2.2/spooles.a)
+SPOOLES_LIBS      = -lspooles
+#
+# ARPACK include flags (e.g. -I$(HOME)/ARPACK)
+ARPACK_INCLUDE    =
+# ARPACK library flags (e.g. $(HOME)/ARPACK/libarpack_INTEL.a)
+ARPACK_LIBS       = -larpack -llapack -lblas
+#
+# yaml-cpp include flags (e.g. -I$(HOME)/yaml-cpp/include)
+YAML_INCLUDE      = -I/usr/include/
+# yaml-cpp library flags (e.g. -L$(HOME)/yaml-cpp/build -lyaml-cpp)
+YAML_LIBS         = -lyaml-cpp
 
 # Get the CFLAGS and LIBS from pkg-config (preCICE version >= 1.4.0).
 # If pkg-config cannot find the libprecice.pc meta-file, you may need to set the
@@ -24,25 +34,18 @@ INCLUDES = \
 	-I./ \
 	-I./adapter \
 	-I$(CCX) \
-	-I$(SPOOLES) \
+	$(SPOOLES_INCLUDE) \
 	$(PKGCONF_CFLAGS) \
-	-I$(ARPACK) \
-	-I$(YAML)/include
+	$(ARPACK_INCLUDE) \
+	$(YAML_INCLUDE)
 
 LIBS = \
-	$(SPOOLES)/spooles.a \
+	$(SPOOLES_LIBS) \
 	$(PKGCONF_LIBS) \
 	-lstdc++ \
-	-L$(YAML)/build -lyaml-cpp \
-
-# OS-specific options
-UNAME_S := $(shell uname -s)
-ifeq ($(UNAME_S),Darwin)
-	LIBS += $(ARPACK)/libarpack_MAC.a
-else
-	LIBS += $(ARPACK)/libarpack_INTEL.a
-	LIBS += -lpthread -lm -lc
-endif
+	$(YAML_LIBS) \
+	$(ARPACK_LIBS) \
+	-lpthread -lm -lc
 
 # Compilers and flags
 #CFLAGS = -g -Wall -std=c++11 -O0 -fopenmp $(INCLUDES) -DARCH="Linux" -DSPOOLES -DARPACK -DMATRIXSTORAGE
@@ -51,20 +54,22 @@ endif
 CFLAGS = -Wall -O3 -fopenmp $(INCLUDES) -DARCH="Linux" -DSPOOLES -DARPACK -DMATRIXSTORAGE
 
 # OS-specific options
+UNAME_S := $(shell uname -s)
 ifeq ($(UNAME_S),Darwin)
 	CC = /usr/local/bin/gcc
 else
 	CC = mpicc
 endif
 
 FFLAGS = -Wall -O3 -fopenmp $(INCLUDES)
+# Note for GCC 10 or newer: add -fallow-argument-mismatch in the above flags
 FC = mpifort
 # FC = mpif90
 # FC = gfortran
 
 # Include a list of all the source files
 include $(CCX)/Makefile.inc
-SCCXMAIN = ccx_2.16.c
+SCCXMAIN = ccx_2.17.c
 
 # Append additional sources
 SCCXC += nonlingeo_precice.c CCXHelpers.c PreciceInterface.c
@@ -80,7 +85,7 @@ $(OBJDIR)/%.o : %.f
 $(OBJDIR)/%.o : adapter/%.c
 	$(CC) $(CFLAGS) -c $< -o $@
 $(OBJDIR)/%.o : adapter/%.cpp
-	g++ -std=c++11 -I$(YAML)/include -c $< -o $@ $(LIBS)
+	g++ -std=c++11 $(YAML_INCLUDE) -c $< -o $@ $(LIBS)
 	#$(CC) $(CFLAGS) $(INCLUDES) -c $< -o $@ $(LIBS)
 
 # Source files in the $(CCX) folder
@@ -97,14 +102,14 @@ OCCXC += $(OBJDIR)/ConfigReader.o
 
 
 
-$(OBJDIR)/ccx_preCICE: $(OBJDIR) $(OCCXMAIN) $(OBJDIR)/ccx_2.16.a
-	$(FC) -fopenmp -Wall -O3 -o $@ $(OCCXMAIN) $(OBJDIR)/ccx_2.16.a $(LIBS)
+$(OBJDIR)/ccx_preCICE: $(OBJDIR) $(OCCXMAIN) $(OBJDIR)/ccx_2.17.a
+	$(FC) -fopenmp -Wall -O3 -o $@ $(OCCXMAIN) $(OBJDIR)/ccx_2.17.a $(LIBS)
 
-$(OBJDIR)/ccx_2.16.a: $(OCCXF) $(OCCXC)
+$(OBJDIR)/ccx_2.17.a: $(OCCXF) $(OCCXC)
 	ar vr $@ $?
 
 $(OBJDIR):
 	mkdir -p $(OBJDIR)
 
 clean:
-	rm -f $(OBJDIR)/*.o $(OBJDIR)/ccx_2.16.a $(OBJDIR)/ccx_preCICE
+	rm -f $(OBJDIR)/*.o $(OBJDIR)/ccx_2.17.a $(OBJDIR)/ccx_preCICE

README.md

@@ -4,10 +4,10 @@
 
 The adapter was initially developed for conjugate heat transfer (CHT) simulations via preCICE by Lucia Cheung in the scope of her master’s thesis [[1]](https://www5.in.tum.de/pub/Cheung2016_Thesis.pdf) in cooperation with [SimScale](https://www.simscale.com/). For running the adapter for CHT simulations refer to this thesis. The adapter was extended to fluid-structure interaction by Alexander Rusch [[2]](https://www.gacm2017.uni-stuttgart.de/registration/Upload/ExtendedAbstracts/ExtendedAbstract_0138.pdf).
 
-This adapter was developed for **CalculiX version 2.16.** Other versions may be compatible, yet they have not been tested. Please let us know if you want to use a different version.
+This adapter was developed for **CalculiX version 2.17.** Other versions may be compatible, yet they have not been tested. Please let us know if you want to use a different version.
 
 Adapters for other versions of CalculiX and preCICE are available in various branches. Branches compatible with **preCICE v2.x:**
- - master
+ - master (currently still for CalculiX v2.16)
  - v2.15_preCICE2.x
 
  All other branches are compatible with **preCICE v1.x**.