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@populationgenomics

Centre for Population Genomics

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  1. talos talos Public

    Rare Disease variant reanalysis tool

    Python 8 4

  2. production-pipelines production-pipelines Public

    Genomics workflows for CPG using Hail Batch

    Python 7 1

  3. cpg-cost-control cpg-cost-control Public

    A Cloud Function to handle GCP billing budget notifications.

    Python 6 3

  4. cuKING cuKING Public

    CUDA-based KING relatedness estimation

    Cuda 6

  5. cpg-infrastructure cpg-infrastructure Public

    This repository is used to manage the infrastructure at the CPG

    Python 4 1

  6. seqr seqr Public

    Forked from broadinstitute/seqr

    web-based analysis tool for rare disease genomics

    Python 3 1

Repositories

Showing 10 of 72 repositories
  • talos Public

    Rare Disease variant reanalysis tool

    populationgenomics/talos’s past year of commit activity
    Python 8 MIT 4 13 7 Updated Mar 6, 2025
  • ClinvArbitration Public

    A side-project from the AIP, containing the code, logic, and documentation for the ClinVar consequence reassessment process in use at the CPG

    populationgenomics/ClinvArbitration’s past year of commit activity
    Python 1 MIT 0 1 2 Updated Mar 6, 2025
  • analysis-runner Public
    populationgenomics/analysis-runner’s past year of commit activity
    Python 2 MIT 4 9 (2 issues need help) 5 Updated Mar 6, 2025
  • images Public

    Reusable single-software docker images

    populationgenomics/images’s past year of commit activity
    Dockerfile 1 MIT 1 2 10 Updated Mar 6, 2025
  • seqr Public Forked from broadinstitute/seqr

    web-based analysis tool for rare disease genomics

    populationgenomics/seqr’s past year of commit activity
    Python 3 AGPL-3.0 90 28 4 Updated Mar 6, 2025
  • production-pipelines Public

    Genomics workflows for CPG using Hail Batch

    populationgenomics/production-pipelines’s past year of commit activity
    Python 7 MIT 1 46 (1 issue needs help) 38 Updated Mar 5, 2025
  • ourdna-browser Public
    populationgenomics/ourdna-browser’s past year of commit activity
    Makefile 0 MIT 0 0 0 Updated Mar 4, 2025
  • metamist Public

    Sample level metadata system

    populationgenomics/metamist’s past year of commit activity
    Python 2 MIT 2 43 21 Updated Mar 4, 2025
  • cpg-flow Public

    CPG Pipeline Python API

    populationgenomics/cpg-flow’s past year of commit activity
    Python 0 MIT 0 3 3 Updated Mar 4, 2025
  • references Public

    Reference data for bioinformatics workflows

    populationgenomics/references’s past year of commit activity
    Python 1 MIT 2 3 4 Updated Mar 3, 2025
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