ci: test fix missing install command

phac-nml · Dec 1, 2023 · 212f2ed · 212f2ed
1 parent dd84f72
commit 212f2ed
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Showing 2 changed files with 5 additions and 2 deletions.
diff --git a/.github/workflows/latest.yaml b/.github/workflows/latest.yaml
@@ -72,13 +72,16 @@ jobs:
         run: |
           ${{ env.RUN_CMD }} dataset download --name sars-cov-2 --tag latest --output-dir dataset/sars-cov-2/latest
 
+      - name: run
+        run: |
+          ${{ env.RUN_CMD }} run  --dataset-dir dataset/sars-cov-2/latest --output-dir output/validate --populations "*" --threads 2
+
       - name: plot
         run: |
           ${{ env.RUN_CMD }} plot --dataset-dir dataset/sars-cov-2/latest --run-dir output/validate
 
       - name: validate
         run: |
-          ${{ env.RUN_CMD }} run  --dataset-dir dataset/sars-cov-2/latest --output-dir output/validate --populations "*" --threads 2
           if [[ $(grep "fail" output/validate/linelist.tsv) ]]; then exit 1; fi
 
       - name: upload

diff --git a/.github/workflows/test.yaml b/.github/workflows/test.yaml
@@ -81,7 +81,7 @@ jobs:
           path: target/${{ matrix.arch }}/release
 
       - name: install
-        if: matrix.os == 'windows-latest'
+        if: ${{ matrix.arch != 'docker' }}
         run: |
           chmod +x target/${{ matrix.arch }}/release/${{ matrix.binary }}
           cp target/${{ matrix.arch }}/release/${{ matrix.binary }} .