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Smoldot sometimes stops reporting finalized blocks to us. Since we are recovering from the relay chain with a huge delay on full nodes, we can not rely on import notifications to set the best block. Because sometimes we also do not receive finality notifications, the height check in zombienet fails.
Proper solution is to update smoldot, there have been some changes since the version we use. But upgrade is blocked by version conflict which will be resolved with #1631.