Repositories list

• COSMIC-CryoEM-Gateway

  Public
  Web platform for analyzing cryo-EM data on Comet cluster at San Diego Supercomputer Center

  Java

  •

  GNU General Public License v3.0

  •1•9•43•5•Updated Feb 15, 2024Feb 15, 2024

• Automatic-cryoEM-preprocessing

  Public
  Tools for user-free preprocessing of cryo-EM datasets

  Python

  •

  MIT License

  •9•26•0•4•Updated Nov 22, 2022Nov 22, 2022

• scipion-installer

  Public
  Scipion app installer for version 3. Compatible with python2 and python3. It creates virtualenv or conda environments.

  Python

  •

  GNU General Public License v3.0

  •2•1•0•0•Updated Aug 17, 2020Aug 17, 2020

• Dose-validation

  Public
  Python

  •

  MIT License

  •1•1•0•0•Updated Apr 26, 2019Apr 26, 2019

• Noise2Noise-Cryo-EM-image-denoising

  Public
  pytorch implementation of noise2noise for Cryo-EM image denoising

  Python

  •

  MIT License

  •13•0•0•0•Updated Dec 5, 2018Dec 5, 2018

• GAN-for-Cryo-EM-image-denoising

  Public
  Proof-of-principle studies with conditional generative adversarial networks to denoise Cryo-EM images

  Python

  •

  MIT License

  •8•10•0•0•Updated Oct 11, 2018Oct 11, 2018

• cryoem-cloud-tools

  Public
  Software to integrate Relion GUI with Amazon Web Services, accompanied by easy command line tools. Learn more at cryoem-tools.cloud

  awscryo-emrelion

  C++

  •

  MIT License

  •10•8•25•0•Updated Jun 27, 2018Jun 27, 2018

• Old-school-processing

  Public
  Pre-revolution cryo-EM scripts

  cryo-em

  Python

  •

  MIT License

  •4•8•0•0•Updated Jun 9, 2018Jun 9, 2018

• Motion-correction

  Public
  Scripts for aligning cryo-electron microscopy direct electron detector movies on whole movies or individual particle trajectories

  C++

  •

  MIT License

  •7•0•0•0•Updated Sep 26, 2017Sep 26, 2017