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    5 repositories

    • compbioteam.github.io

      Public
      Lab Website
      CSS
      •
      MIT License
      •4•0•0•0•Updated Oct 17, 2024Oct 17, 2024

    • DupTree

      Public
      DupTree is a program for phylogenetic analyses using gene tree parsimony. That is, given a collection of binary gene trees, DupTree searches for a species supertree that implies the fewest number of gene duplication events.
      GNU General Public License v3.0
      •0•0•0•0•Updated May 7, 2024May 7, 2024

    • RF-Supertrees

      Public
      This program takes as input a collection of rooted trees and heuristically searches for a binary supertree that minimizes the total (rooted) Robinson-Foulds distance between the supertree and the input trees.
      GNU General Public License v3.0
      •0•0•0•0•Updated Sep 27, 2023Sep 27, 2023

    • biclique

      Public
      This is an implementation of maximal biclique enumeration algorithm from Alexe et al. (http://citeseer.nj.nec.com/alexe02consensus.html)
      GNU General Public License v3.0
      •0•0•0•0•Updated Sep 27, 2023Sep 27, 2023

    • iGTP

      Public
      0•0•0•0•Updated Sep 6, 2023Sep 6, 2023