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feat(gwas catalog sumstats): finemapping #51

Merged
merged 16 commits into from
Oct 25, 2024
Merged

feat(gwas catalog sumstats): finemapping #51

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6e65d46
feat(gwas catalog sumstats): dag for locus breaker
Oct 18, 2024
dcde45e
feat: updated config
Oct 18, 2024
8f2f1c7
docs(gwas catalog): sumstat processing
Oct 21, 2024
f51a327
perf(gwas catalog): lb clumping insufficient partition size
Oct 21, 2024
a178488
Merge branch 'dev' into szsz-gwas-catalog-sumstat-locus-breaker
Oct 21, 2024
5b0df93
perf(locus_breaker): spark configuration update
Oct 22, 2024
a928dba
docs(gwas_catalog): update
Oct 22, 2024
19374fa
feat(finemapping): gwas catalog sumstats
Oct 22, 2024
2c645a4
Merge branch 'dev' into szsz-gwas-catalog-sumstat-locus-breaker
project-defiant Oct 22, 2024
d7e3205
feat(finemapping): manifest cache
Oct 22, 2024
1554c14
docs(gwas catalog): susie dataset
Oct 22, 2024
40366c3
feat: sequential write
Oct 22, 2024
c62e3b9
Merge branch 'dev' into szsz-gwas-catalog-sumstat-locus-breaker
project-defiant Oct 23, 2024
d444a8b
feat: caching of finemapped loci
Oct 25, 2024
c5a8b54
Merge branch 'dev' into szsz-gwas-catalog-sumstat-locus-breaker
project-defiant Oct 25, 2024
47eaefd
chore: change branch back to dev
Oct 25, 2024
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339 changes: 300 additions & 39 deletions docs/datasources/gwas_catalog_data/README.md
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113 changes: 113 additions & 0 deletions docs/datasources/gwas_catalog_data/gwas_catalog_sumstats_pics.svg
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56 changes: 56 additions & 0 deletions docs/datasources/gwas_catalog_data/gwas_catalog_sumstats_susie_clumping.svg
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32 changes: 32 additions & 0 deletions docs/datasources/gwas_catalog_data/gwas_catalog_sumstats_susie_finemapping.svg
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