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Axes v0.4#93

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sbesson merged 16 commits intoome:masterome/omero-cli-zarr:masterfrom will-moore:axes_v0.4will-moore/omero-cli-zarr:axes_v0.4Copy head branch name to clipboardJan 31, 2022

+136-56

Commits

Commits on Dec 20, 2021

• Export axes as dict of name and type for Image

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• Update version to 0.4

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• Add units info to axes

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• Move axes creation to add_image()

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• add_image() also does add_multiscales_metadata()

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• Define path = str(level) in 1 place only

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• Add 'transformations' support for x, y, z

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Commits on Jan 18, 2022

• Use ome-zarr-py write_multiscales_metadata()

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Commits on Jan 19, 2022

• Use ome-zarr .write_plate_metadata()

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Commits on Jan 20, 2022

• use same axes and transf creation for image and labels

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Commits on Jan 25, 2022

• ngff_version = CurrentFormat().version

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• Use ome_zarr.writer.write_well_metadata()

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• Remove hard-coded version in masks.py

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• Split marshal_transformations() into separate function

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• Fix marshal_axes/transformations in MaskSaver

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• setup.py requires ome-zarr>=0.3a1

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