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FIX: Accept images with any axis orientation #7

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merged 2 commits into from
May 22, 2017

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effigies
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Up until now, assumed axes were always R/L, A/P, S/I. This adds the machinery to permute into RPS and correctly return to the original space. (Canonicalization is beyond the scope of this algorithm.)

@effigies effigies requested a review from yarikoptic May 15, 2017 19:05
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@yarikoptic Testing on raiders/sub001:

bet highres004_defaced.nii.gz highres004_bet.nii.gz -m -f 0.3
quickshear highres004_defaced.nii.gz highres004_bet_mask.nii.gz highres004_quickshear.nii.gz

@effigies effigies force-pushed the fix/permute_axes branch from 8e4259d to 1cfd4df Compare May 16, 2017 15:01
@effigies effigies merged commit a61770c into nipy:master May 22, 2017
@effigies effigies deleted the fix/permute_axes branch May 22, 2017 15:03
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