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When calling nf-core create from a template, the name field may contain, for example, dashes which are not accepted when populating the fields interactively. This will generate a broken pipeline due to Groovy class names with hyphens. So the input from the template should be better validated. Incidentally, the example in the documentation also contains a hyphen which seems a terrible idea.
Command used and terminal output
nf-core create --template-yaml template.yml
System information
nf-core/tools version 2.5.1
The text was updated successfully, but these errors were encountered:
Description of the bug
When calling
nf-core create
from a template, the name field may contain, for example, dashes which are not accepted when populating the fields interactively. This will generate a broken pipeline due to Groovy class names with hyphens. So the input from the template should be better validated. Incidentally, the example in the documentation also contains a hyphen which seems a terrible idea.Command used and terminal output
nf-core create --template-yaml template.yml
System information
nf-core/tools version 2.5.1
The text was updated successfully, but these errors were encountered: