Fix double assignment of branch

nf-core · Aug 5, 2022 · 63282dc · 63282dc
1 parent ccdd00d
commit 63282dc
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Showing 2 changed files with 2 additions and 4 deletions.
diff --git a/nf_core/modules/patch.py b/nf_core/modules/patch.py
@@ -54,8 +54,7 @@ def patch(self, module=None):
         # Get the module branch and reset it in the ModulesRepo object
         module_branch = self.modules_json.get_module_branch(module, self.modules_repo.fullname)
         if module_branch != self.modules_repo.branch:
-            self.modules_repo.branch = module_branch
-            self.modules_repo.setup_branch()
+            self.modules_repo.setup_branch(module_branch)
 
         # Set the diff filename based on the module name
         patch_filename = f"{module.replace('/', '-')}.diff"

diff --git a/nf_core/modules/update.py b/nf_core/modules/update.py
@@ -328,8 +328,7 @@ def get_single_module_info(self, module):
             switch = questionary.confirm(f"Do you want to update using the '{current_branch}' instead?").unsafe_ask()
             if switch:
                 # Change the branch
-                self.modules_repo.branch = current_branch
-                self.modules_repo.setup_branch()
+                self.modules_repo.setup_branch(current_branch)
 
         # If there is a patch file, get its filename
         patch_fn = self.modules_json.get_patch_fn(module, self.modules_repo.fullname)