Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Fix samplesheet validation #613

Open
wants to merge 4 commits into
base: dev
Choose a base branch
from
Open

Fix samplesheet validation #613

Show file tree
Hide file tree
Changes from all commits
Commits
Show all changes
4 commits
Select commit Hold shift + click to select a range
1022322
Fix samplesheet validation
tdanhorn Jan 22, 2025
535138c
Merge branch 'dev' into input-validation
rannick Jan 22, 2025
11e0b18
Fix CHANGELOG.md
tdanhorn Feb 9, 2025
35ac788
Revert "Fix CHANGELOG.md"
tdanhorn Feb 9, 2025
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
1 change: 1 addition & 0 deletions CHANGELOG.md
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -56,6 +56,7 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0
- Fixed bug in `GFFREAD` that caused output `gffread_fasta` not being produced [#565](https://github.com/nf-core/rnafusion/issues/565)
- Fixed bug in `FUSIONCATCHER_DOWNLOAD` that caused an error when running with singularity profile [#573](https://github.com/nf-core/rnafusion/issues/573)
- Fixed missing script `gtf2bed` which caused local module `GET_RRNA_TRANSCRIPTS` to fail [#602](https://github.com/nf-core/rnafusion/issues/602)
- Fixed samplesheet validation which caused errors on single-end reads [#612](https://github.com/nf-core/rnafusion/issues/612)
tdanhorn marked this conversation as resolved.
Show resolved Hide resolved

### Removed

Expand Down
2 changes: 1 addition & 1 deletion assets/schema_input.json
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -33,6 +33,6 @@
"errorMessage": "Strandedness has to be forward, reverse, unstranded or unknown"
}
},
"required": ["sample", "fastq_1", "fastq_2", "strandedness"]
"required": ["sample", "fastq_1", "strandedness"]
}
}