Merge pull request #20 from maxulysse/dev

comment mags_size
nf-core · May 22, 2024 · c8e1564 · c8e1564
2 parents 7a3b939 + 0ac54ed
commit c8e1564
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Showing 4 changed files with 4 additions and 3 deletions.
diff --git a/assets/genomes/homo_sapiens/ucsc/hg19.yml b/assets/genomes/homo_sapiens/ucsc/hg19.yml
@@ -5,4 +5,4 @@
   gtf: "s3://ngi-igenomes/igenomes/Homo_sapiens/UCSC/hg19/Annotation/Genes/genes.gtf"
   bed12: "s3://ngi-igenomes/igenomes/Homo_sapiens/UCSC/hg19/Annotation/Genes/genes.bed"
   mito_name: chrM
-  macs_gsize: 2.7e9
+  # macs_gsize: 2.7e9
diff --git a/assets/genomes/homo_sapiens/ucsc/hg38.yml b/assets/genomes/homo_sapiens/ucsc/hg38.yml
@@ -5,4 +5,4 @@
   gtf: "s3://ngi-igenomes/igenomes/Homo_sapiens/UCSC/hg38/Annotation/Genes/genes.gtf"
   bed12: "s3://ngi-igenomes/igenomes/Homo_sapiens/UCSC/hg38/Annotation/Genes/genes.bed"
   mito_name: chrM
-  macs_gsize: 2.7e9
+  # macs_gsize: 2.7e9
diff --git a/assets/genomes/test/pipelines/R64-1-1.yml b/assets/genomes/test/pipelines/R64-1-1.yml
@@ -3,7 +3,7 @@
   gtf: s3://ngi-igenomes/igenomes/Saccharomyces_cerevisiae/Ensembl/R64-1-1/Annotation/Genes/genes.gtf
   bed12: s3://ngi-igenomes/igenomes/Saccharomyces_cerevisiae/Ensembl/R64-1-1/Annotation/Genes/genes.bed
   mito_name: MT
-  macs_gsize: 1.2e7
+  # macs_gsize: 1.2e7
   readme: s3://ngi-igenomes/igenomes/Saccharomyces_cerevisiae/Ensembl/R64-1-1/Annotation/README.txt
 # TODO
 # Required

diff --git a/assets/genomes/test/pipelines/nascent.yml b/assets/genomes/test/pipelines/nascent.yml
@@ -2,4 +2,5 @@
   fasta: "https://raw.githubusercontent.com/nf-core/test-datasets/nascent/reference/GRCh38_chr21.fa"
   gtf: "https://raw.githubusercontent.com/nf-core/test-datasets/nascent/reference/genes_chr21.gtf"
   mito_name: "MT"
+  # macs_gsize: 1.2e7
   readme: "https://raw.githubusercontent.com/nf-core/test-datasets/nascent/README.md"