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Merge pull request #220 from nf-core/i218 #615

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Merge pull request #220 from nf-core/i218

Merge pull request #220 from nf-core/i218 #615

Triggered via push January 17, 2025 15:44
@heuermhheuermh
pushed b1bca81
dev
Status Success
Total duration 5m 11s
Artifacts –

ci.yml

on: push
Matrix: Run pipeline with community parameters
Matrix: Run pipeline with metric parameter suffixes
Matrix: Run pipeline with smoothxg parameters
Matrix: test
Matrix: Run pipeline with vg deconstruct parameters
Matrix: Run pipeline with wfmash_chunks parameters
Matrix: Run pipeline with wfmash_only parameters
Matrix: Run pipeline with wfmash_sparse_map parameters
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13 warnings
Run pipeline with wfmash_only parameters (--wfmash_only)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
Run pipeline with metric parameter suffixes (--wfmash_sequence_length 8k --wfmash_block_length 38...
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
Run pipeline with smoothxg parameters (--smoothxg_write_maf --smoothxg_poa_length 100,200,300 --s...
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
Run pipeline with wfmash_sparse_map parameters (--wfmash_sparse_map auto)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
Run pipeline with smoothxg parameters (--smoothxg_poa_params asm10)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
Run pipeline with wfmash_sparse_map parameters (--wfmash_sparse_map 0.5)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
Run pipeline with wfmash_chunks parameters (--wfmash_chunks 2)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
Run pipeline with community parameters (--communities --wfmash_chunks 2)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
Run pipeline with community parameters (--communities)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
Run pipeline with vg deconstruct parameters (--vcf_spec "gi|568815561:5,gi|568815567:25")
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
Run pipeline with community parameters (--communities --vcf_spec "gi|568815561:5,gi|568815567:25")
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
Run pipeline with test data (24.04.2 | test | docker)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
Run pipeline with test data (latest-everything | test | docker)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636