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Co-authored-by: Anabella Trigila <18577080+atrigila@users.noreply.github.com>
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charles-plessy and atrigila authored Oct 9, 2024
1 parent 3503b2b commit 6974029
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion nextflow_schema.json
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"softmask": {
"type": "string",
"enum": ["tantan", "original"],
"help_text": "In this pipeline, letters soft-masked in lowercase are excluded from indexing (`lastdb -c`). By default, the original mask is removed and a new one is made with an internal verison of the “tantan” tool. Set this option to `original` to keep the orininal soft-masking. See <https://gitlab.com/mcfrith/last/-/blob/main/doc/lastdb.rst> for details.",
"help_text": "In this pipeline, letters soft-masked in lowercase are excluded from indexing (`lastdb -c`). By default, the original mask is removed and a new one is made with an internal version of the “tantan” tool. Set this option to `original` to keep the original soft-masking. See <https://gitlab.com/mcfrith/last/-/blob/main/doc/lastdb.rst> for details.",
"description": "Customise the way to mask the _target_ genome.",
"default": "tantan",
"fa_icon": "fas fa-theater-masks"
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