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fixing mapping error
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tanyasarkjain committed Nov 21, 2024
1 parent fc27915 commit 23bae51
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion subworkflows/local/bam_snp_variant_calling/main.nf
Original file line number Diff line number Diff line change
Expand Up @@ -16,7 +16,7 @@ workflow BAM_SNP_VARIANT_CALLING {
//deepvariant
if (params.tools.split(',').contains('deepvariant')) {
deepvar_input_ch = sorted_bam.join(sorted_bai)
.map{meta, bam, bai ->
.map{metadata, bam, bai ->
[metadata, bam, bai, intervals]
}

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