Dev => Master 2.3.0 #530
Triggered via pull request
December 23, 2024 16:36
edmundmiller
Status
Cancelled
Total duration
35m 14s
Artifacts
–
Annotations
13 errors and 29 warnings
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Run pipeline with test data (24.04.2 | test | conda)
Process completed with exit code 1.
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Run pipeline with test data (latest-everything | test | conda)
Process completed with exit code 1.
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Run pipeline with test data (24.04.2 | test | conda)
Process completed with exit code 1.
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Run pipeline with test data (24.04.2 | test | conda)
Canceling since a higher priority waiting request for 'nf-core CI-185' exists
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Run pipeline with test data (24.04.2 | test | conda)
Process completed with exit code 1.
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Run pipeline with test data (24.04.2 | test | conda)
Canceling since a higher priority waiting request for 'nf-core CI-185' exists
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Run pipeline with test data (24.04.2 | test | conda)
The operation was canceled.
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Run pipeline with test data (latest-everything | test | conda)
Canceling since a higher priority waiting request for 'nf-core CI-185' exists
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Run pipeline with test data (latest-everything | test | conda)
The operation was canceled.
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Run pipeline with test data (latest-everything | test | conda)
Canceling since a higher priority waiting request for 'nf-core CI-185' exists
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Run pipeline with test data (latest-everything | test | conda)
The operation was canceled.
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Run pipeline with test data (latest-everything | test | conda)
Canceling since a higher priority waiting request for 'nf-core CI-185' exists
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Run pipeline with test data (latest-everything | test | conda)
The operation was canceled.
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Run pipeline with test data (latest-everything | test | singularity)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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Run pipeline with test data (24.04.2 | test | singularity)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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Run pipeline with test data (latest-everything | test | docker)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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Run pipeline with test data (24.04.2 | test | docker)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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Run pipeline with test data (latest-everything | test | singularity)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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Run pipeline with test data (latest-everything | test | docker)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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Run pipeline with test data (24.04.2 | test | singularity)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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Run pipeline with test data (24.04.2 | test | docker)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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Run pipeline with test data (latest-everything | test | singularity)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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Run pipeline with test data (latest-everything | test | docker)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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Run pipeline with test data (24.04.2 | test | singularity)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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Run pipeline with test data (latest-everything | test | singularity)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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Run pipeline with test data (24.04.2 | test | singularity)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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Run pipeline with test data (24.04.2 | test | singularity)
Failed to download action 'https://api.github.com/repos/nf-core/setup-nextflow/tarball/6c2e22b4d901f0c42ca66c5069f8026df026d165'. Error: The request was canceled due to the configured HttpClient.Timeout of 100 seconds elapsing.
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Run pipeline with test data (24.04.2 | test | singularity)
Back off 24.678 seconds before retry.
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Run pipeline with test data (24.04.2 | test | conda)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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Run pipeline with test data (24.04.2 | test | conda)
/home/runner/miniconda3/lib/python3.12/site-packages/conda/base/context.py:201: FutureWarning: Adding 'defaults' to channel list implicitly is deprecated and will be removed in 25.3.
To remove this warning, please choose a default channel explicitly with conda's regular configuration system, e.g. by adding 'defaults' to the list of channels:
conda config --add channels defaults
For more information see https://docs.conda.io/projects/conda/en/stable/user-guide/configuration/use-condarc.html
deprecated.topic(
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Run pipeline with test data (24.04.2 | test | docker)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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Run pipeline with test data (24.04.2 | test | docker)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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Run pipeline with test data (latest-everything | test | docker)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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Run pipeline with test data (latest-everything | test | conda)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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Run pipeline with test data (latest-everything | test | conda)
/home/runner/miniconda3/lib/python3.12/site-packages/conda/base/context.py:201: FutureWarning: Adding 'defaults' to channel list implicitly is deprecated and will be removed in 25.3.
To remove this warning, please choose a default channel explicitly with conda's regular configuration system, e.g. by adding 'defaults' to the list of channels:
conda config --add channels defaults
For more information see https://docs.conda.io/projects/conda/en/stable/user-guide/configuration/use-condarc.html
deprecated.topic(
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Run pipeline with test data (24.04.2 | test | conda)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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Run pipeline with test data (24.04.2 | test | conda)
/home/runner/miniconda3/lib/python3.12/site-packages/conda/base/context.py:201: FutureWarning: Adding 'defaults' to channel list implicitly is deprecated and will be removed in 25.3.
To remove this warning, please choose a default channel explicitly with conda's regular configuration system, e.g. by adding 'defaults' to the list of channels:
conda config --add channels defaults
For more information see https://docs.conda.io/projects/conda/en/stable/user-guide/configuration/use-condarc.html
deprecated.topic(
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Run pipeline with test data (24.04.2 | test | conda)
/home/runner/miniconda3/lib/python3.12/site-packages/conda/base/context.py:201: FutureWarning: Adding 'defaults' to channel list implicitly is deprecated and will be removed in 25.3.
To remove this warning, please choose a default channel explicitly with conda's regular configuration system, e.g. by adding 'defaults' to the list of channels:
conda config --add channels defaults
For more information see https://docs.conda.io/projects/conda/en/stable/user-guide/configuration/use-condarc.html
deprecated.topic(
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Run pipeline with test data (24.04.2 | test | conda)
/home/runner/miniconda3/lib/python3.12/site-packages/conda/base/context.py:201: FutureWarning: Adding 'defaults' to channel list implicitly is deprecated and will be removed in 25.3.
To remove this warning, please choose a default channel explicitly with conda's regular configuration system, e.g. by adding 'defaults' to the list of channels:
conda config --add channels defaults
For more information see https://docs.conda.io/projects/conda/en/stable/user-guide/configuration/use-condarc.html
deprecated.topic(
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Run pipeline with test data (latest-everything | test | conda)
/home/runner/miniconda3/lib/python3.12/site-packages/conda/base/context.py:201: FutureWarning: Adding 'defaults' to channel list implicitly is deprecated and will be removed in 25.3.
To remove this warning, please choose a default channel explicitly with conda's regular configuration system, e.g. by adding 'defaults' to the list of channels:
conda config --add channels defaults
For more information see https://docs.conda.io/projects/conda/en/stable/user-guide/configuration/use-condarc.html
deprecated.topic(
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Run pipeline with test data (latest-everything | test | conda)
/home/runner/miniconda3/lib/python3.12/site-packages/conda/base/context.py:201: FutureWarning: Adding 'defaults' to channel list implicitly is deprecated and will be removed in 25.3.
To remove this warning, please choose a default channel explicitly with conda's regular configuration system, e.g. by adding 'defaults' to the list of channels:
conda config --add channels defaults
For more information see https://docs.conda.io/projects/conda/en/stable/user-guide/configuration/use-condarc.html
deprecated.topic(
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Run pipeline with test data (latest-everything | test | conda)
/home/runner/miniconda3/lib/python3.12/site-packages/conda/base/context.py:201: FutureWarning: Adding 'defaults' to channel list implicitly is deprecated and will be removed in 25.3.
To remove this warning, please choose a default channel explicitly with conda's regular configuration system, e.g. by adding 'defaults' to the list of channels:
conda config --add channels defaults
For more information see https://docs.conda.io/projects/conda/en/stable/user-guide/configuration/use-condarc.html
deprecated.topic(
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