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Default registry to quay.io#3344

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adamrtalbot merged 21 commits intonf-core:masternf-core/modules:masterfrom adamrtalbot:default_registry_to_quay.ioadamrtalbot/modules:default_registry_to_quay.ioCopy head branch name to clipboardMay 2, 2023

+120-80

Commits

Commits on Apr 27, 2023

• Add default registry for Docker and Podman to quay.io

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• Use full URI for all modules

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• Merge branch 'master' into default_registry_to_quay.io

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• More docker.io added to container specs

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• More docker.io

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• Correct docker container for VEP

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• Artifacts named after specific run

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• Update universc image name to use nfcore/universc instead of biocontainers/universc

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• Revert snpeff docker container to nfcore/snpeff

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• Update cellranger/count md5sum tests

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• Remove eido md5sum because it doesn't work on conda

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Commits on Apr 28, 2023

• Fix eido version string

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• correct md5sums

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• Omit gatk4 conda tools that don't work

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• Remove slashes from tags for uploading artifacts

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• bb22faef28dfb0b3b106bd5cc320bf09

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• Correct string parsing for artifact upload

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• Remove singularity gatk4/determinegermlinecontigploidy test because it just breaks the VM after too long

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• Merge branch 'master' into default_registry_to_quay.io

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• fix-meta-liniting

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Commits on May 2, 2023

• Merge remote-tracking branch 'sateesh/fix/v2.8-meta-linting-errors' into default_registry_to_quay.io

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