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Add CI to build mulled containers with Wave #16914

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Add CI to build mulled containers with Wave

Add CI to build mulled containers with Wave #16914

Run time

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Job Run time
prettier
31s
pre-commit
48s
editorconfig
11s
nf-test-changes
3m 29s
pytest-changes
5s
pytest
0s
nf-core-lint-modules (bam_subsampledepth_samtools)
50s
nf-core-lint-modules (bam_dedup_stats_samtools_umicollapse)
45s
nf-core-lint-modules (fastq_find_mirna_mirdeep2)
41s
nf-core-lint-modules (limma/differential)
1m 12s
nf-core-lint-modules (cellranger/mkfastq)
1m 52s
nf-core-lint-modules (chopper)
1m 7s
nf-core-lint-modules (quast)
1m 49s
nf-core-lint-modules (krakenuniq/preloadedkrakenuniq)
1m 33s
nf-core-lint-modules (xeniumranger/relabel)
1m 51s
nf-core-lint-modules (genmod/models)
1m 16s
nf-core-lint-modules (xeniumranger/import-segmentation)
2m 0s
nf-core-lint-modules (hiphase)
1m 8s
nf-core-lint-modules (ngscheckmate/vafncm)
1m 11s
nf-core-lint-modules (mirdeep2/mirdeep2)
1m 19s
nf-core-lint-modules (doubletdetection)
1m 5s
nf-core-lint-modules (ultraplex)
1m 56s
nf-core-lint-modules (xeniumranger/resegment)
1m 17s
nf-core-lint-modules (umicollapse)
1m 52s
nf-core-lint-modules (metamdbg/asm)
1m 6s
nf-core-lint-modules (pbsv/call)
1m 15s
nf-core-lint-modules (custom/filterdifferentialtable)
1m 6s
nf-core-lint-modules (checkm/lineagewf)
1m 26s
nf-core-lint-modules (scvitools/scar)
1m 5s
nf-core-lint-modules (bowtie/build)
1m 14s
nf-core-lint-modules (hostile/fetch)
1m 14s
nf-core-lint-modules (svdb/merge)
1m 8s
nf-core-lint-modules (checkm/qa)
1m 24s
nf-core-lint-modules (yahs)
1m 50s
nf-core-lint-modules (genmod/score)
1m 11s
nf-core-lint-modules (rtgtools/format)
1m 5s
nf-core-lint-modules (xeniumranger/rename)
1m 11s
nf-core-lint-modules (bowtie/align)
1m 9s
nf-core-lint-modules (samtools/view)
1m 29s
nf-core-lint-modules (ngscheckmate/patterngenerator)
1m 15s
nf-core-lint-modules (scvitools/solo)
1m 51s
nf-core-lint-modules (mirdeep2/mapper)
1m 5s
nf-core-lint-modules (anndata/barcodes)
1m 29s
nf-core-lint-modules (stranger)
1m 18s
nf-core-lint-modules (ngscheckmate/fastq)
1m 8s
nf-core-lint-modules (coptr/index)
1m 49s
nf-test (modules/nf-core/limma/differential, conda)
11m 59s
nf-test (modules/nf-core/limma/differential, docker_self_hosted)
8m 12s
nf-test (modules/nf-core/limma/differential, singularity)
8m 14s
nf-test (modules/nf-core/cellranger/mkfastq, docker_self_hosted)
7m 33s
nf-test (modules/nf-core/cellranger/mkfastq, singularity)
10m 28s
nf-test (modules/nf-core/chopper, conda)
4m 10s
nf-test (modules/nf-core/chopper, docker_self_hosted)
2m 11s
nf-test (modules/nf-core/chopper, singularity)
3m 19s
nf-test (modules/nf-core/quast, conda)
5m 40s
nf-test (modules/nf-core/quast, docker_self_hosted)
3m 47s
nf-test (modules/nf-core/quast, singularity)
3m 0s
nf-test (modules/nf-core/krakenuniq/preloadedkrakenuniq, conda)
8m 18s
nf-test (modules/nf-core/krakenuniq/preloadedkrakenuniq, docker_self_hosted)
3m 40s
nf-test (modules/nf-core/krakenuniq/preloadedkrakenuniq, singularity)
4m 5s
nf-test (modules/nf-core/xeniumranger/relabel, docker_self_hosted)
2m 57s
nf-test (modules/nf-core/xeniumranger/relabel, singularity)
27m 19s
nf-test (modules/nf-core/genmod/models, conda)
3m 22s
nf-test (modules/nf-core/genmod/models, docker_self_hosted)
1m 52s
nf-test (modules/nf-core/genmod/models, singularity)
1m 29s
nf-test (modules/nf-core/xeniumranger/import-segmentation, docker_self_hosted)
35m 40s
nf-test (modules/nf-core/xeniumranger/import-segmentation, singularity)
1h 14m 3s
nf-test (modules/nf-core/hiphase, conda)
2m 56s
nf-test (modules/nf-core/hiphase, docker_self_hosted)
1m 45s
nf-test (modules/nf-core/hiphase, singularity)
1m 57s
nf-test (modules/nf-core/ngscheckmate/vafncm, conda)
6m 20s
nf-test (modules/nf-core/ngscheckmate/vafncm, docker_self_hosted)
1m 16s
nf-test (modules/nf-core/ngscheckmate/vafncm, singularity)
4m 17s
nf-test (modules/nf-core/mirdeep2/mirdeep2, conda)
5m 35s
nf-test (modules/nf-core/mirdeep2/mirdeep2, docker_self_hosted)
1m 42s
nf-test (modules/nf-core/mirdeep2/mirdeep2, singularity)
3m 5s
nf-test (modules/nf-core/doubletdetection, docker_self_hosted)
4m 17s
nf-test (modules/nf-core/doubletdetection, singularity)
3m 8s
nf-test (modules/nf-core/ultraplex, conda)
4m 35s
nf-test (modules/nf-core/ultraplex, docker_self_hosted)
2m 20s
nf-test (modules/nf-core/ultraplex, singularity)
2m 40s
nf-test (modules/nf-core/xeniumranger/resegment, docker_self_hosted)
23m 33s
nf-test (modules/nf-core/xeniumranger/resegment, singularity)
4m 43s
nf-test (modules/nf-core/umicollapse, conda)
1m 45s
nf-test (modules/nf-core/umicollapse, docker_self_hosted)
4m 2s
nf-test (modules/nf-core/umicollapse, singularity)
6m 17s
nf-test (modules/nf-core/metamdbg/asm, conda)
28m 9s
nf-test (modules/nf-core/metamdbg/asm, docker_self_hosted)
25m 32s
nf-test (modules/nf-core/metamdbg/asm, singularity)
27m 43s
nf-test (modules/nf-core/pbsv/call, conda)
3m 21s
nf-test (modules/nf-core/pbsv/call, docker_self_hosted)
1m 29s
nf-test (modules/nf-core/pbsv/call, singularity)
1m 10s
nf-test (modules/nf-core/custom/filterdifferentialtable, conda)
1s
nf-test (modules/nf-core/custom/filterdifferentialtable, docker_self_hosted)
2m 4s
nf-test (modules/nf-core/custom/filterdifferentialtable, singularity)
1m 29s
nf-test (modules/nf-core/checkm/lineagewf, conda)
16m 15s
nf-test (modules/nf-core/checkm/lineagewf, docker_self_hosted)
3m 13s
nf-test (modules/nf-core/checkm/lineagewf, singularity)
3m 56s
nf-test (modules/nf-core/scvitools/scar, conda)
8m 49s
nf-test (modules/nf-core/scvitools/scar, docker_self_hosted)
4m 53s
nf-test (modules/nf-core/scvitools/scar, singularity)
3m 26s
nf-test (modules/nf-core/bowtie/build, conda)
3m 32s
nf-test (modules/nf-core/bowtie/build, docker_self_hosted)
1m 30s
nf-test (modules/nf-core/bowtie/build, singularity)
1m 49s
nf-test (modules/nf-core/hostile/fetch, conda)
1m 34s
nf-test (modules/nf-core/hostile/fetch, docker_self_hosted)
11m 58s
nf-test (modules/nf-core/hostile/fetch, singularity)
6m 41s
nf-test (modules/nf-core/svdb/merge, conda)
10m 5s
nf-test (modules/nf-core/svdb/merge, docker_self_hosted)
5m 54s
nf-test (modules/nf-core/svdb/merge, singularity)
4m 41s
nf-test (modules/nf-core/checkm/qa, conda)
14m 9s
nf-test (modules/nf-core/checkm/qa, docker_self_hosted)
2m 57s
nf-test (modules/nf-core/checkm/qa, singularity)
5m 55s
nf-test (modules/nf-core/yahs, conda)
2m 11s
nf-test (modules/nf-core/yahs, docker_self_hosted)
1m 31s
nf-test (modules/nf-core/yahs, singularity)
1m 47s
nf-test (modules/nf-core/genmod/score, conda)
3m 32s
nf-test (modules/nf-core/genmod/score, docker_self_hosted)
2m 9s
nf-test (modules/nf-core/genmod/score, singularity)
1m 32s
nf-test (subworkflows/nf-core/bam_subsampledepth_samtools, conda)
2m 44s
nf-test (subworkflows/nf-core/bam_subsampledepth_samtools, docker_self_hosted)
1m 48s
nf-test (subworkflows/nf-core/bam_subsampledepth_samtools, singularity)
2m 21s
nf-test (modules/nf-core/rtgtools/format, conda)
1s
nf-test (modules/nf-core/rtgtools/format, docker_self_hosted)
2m 59s
nf-test (modules/nf-core/rtgtools/format, singularity)
4m 36s
nf-test (subworkflows/nf-core/bam_dedup_stats_samtools_umicollapse, conda)
3m 44s
nf-test (subworkflows/nf-core/bam_dedup_stats_samtools_umicollapse, docker_self_hosted)
2m 40s
nf-test (subworkflows/nf-core/bam_dedup_stats_samtools_umicollapse, singularity)
4m 17s
nf-test (modules/nf-core/xeniumranger/rename, docker_self_hosted)
4m 45s
nf-test (modules/nf-core/xeniumranger/rename, singularity)
11m 1s
nf-test (modules/nf-core/bowtie/align, conda)
5m 0s
nf-test (modules/nf-core/bowtie/align, docker_self_hosted)
2m 7s
nf-test (modules/nf-core/bowtie/align, singularity)
2m 19s
nf-test (modules/nf-core/samtools/view, conda)
5m 1s
nf-test (modules/nf-core/samtools/view, docker_self_hosted)
2m 52s
nf-test (modules/nf-core/samtools/view, singularity)
3m 11s
nf-test (modules/nf-core/ngscheckmate/patterngenerator, conda)
3m 35s
nf-test (modules/nf-core/ngscheckmate/patterngenerator, docker_self_hosted)
1m 4s
nf-test (modules/nf-core/ngscheckmate/patterngenerator, singularity)
4m 22s
nf-test (modules/nf-core/scvitools/solo, conda)
2m 48s
nf-test (modules/nf-core/scvitools/solo, docker_self_hosted)
2m 49s
nf-test (modules/nf-core/scvitools/solo, singularity)
2m 41s
nf-test (modules/nf-core/mirdeep2/mapper, conda)
4m 22s
nf-test (modules/nf-core/mirdeep2/mapper, docker_self_hosted)
1m 31s
nf-test (modules/nf-core/mirdeep2/mapper, singularity)
3m 10s
nf-test (modules/nf-core/anndata/barcodes, conda)
4m 32s
nf-test (modules/nf-core/anndata/barcodes, docker_self_hosted)
4m 43s
nf-test (modules/nf-core/anndata/barcodes, singularity)
2m 11s
nf-test (modules/nf-core/stranger, conda)
4m 3s
nf-test (modules/nf-core/stranger, docker_self_hosted)
2m 3s
nf-test (modules/nf-core/stranger, singularity)
3m 25s
nf-test (subworkflows/nf-core/fastq_find_mirna_mirdeep2, conda)
2m 35s
nf-test (subworkflows/nf-core/fastq_find_mirna_mirdeep2, docker_self_hosted)
1m 49s
nf-test (subworkflows/nf-core/fastq_find_mirna_mirdeep2, singularity)
4m 24s
nf-test (modules/nf-core/ngscheckmate/fastq, conda)
7m 37s
nf-test (modules/nf-core/ngscheckmate/fastq, docker_self_hosted)
1m 45s
nf-test (modules/nf-core/ngscheckmate/fastq, singularity)
2m 49s
nf-test (modules/nf-core/coptr/index, conda)
5m 10s
nf-test (modules/nf-core/coptr/index, docker_self_hosted)
2m 2s
nf-test (modules/nf-core/coptr/index, singularity)
2m 18s
confirm-pass
2s
12h 10m 20s