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Update conf/modules.config
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Co-authored-by: Daniel Straub <42973691+d4straub@users.noreply.github.com>
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jfy133 and d4straub authored Oct 25, 2024
1 parent e974653 commit 723e621
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion conf/modules.config
Original file line number Diff line number Diff line change
Expand Up @@ -269,7 +269,7 @@ process {
}

withName: METASPADESHYBRID {
ext.args = params.spades_options ? params.spades_options + '--meta' : '--meta'
ext.args = params.spades_options ? params.spades_options + ' --meta' : '--meta'
ext.prefix = { "SPAdesHybrid-${meta.id}" }
publishDir = [path: { "${params.outdir}/Assembly/SPAdesHybrid" }, mode: params.publish_dir_mode, pattern: "*.{fasta.gz,gfa.gz,fa.gz,log}"]
}
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