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Add resolutions to rsv #68

Merged
merged 7 commits into from
Jul 16, 2024
Merged

Add resolutions to rsv #68

merged 7 commits into from
Jul 16, 2024

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rneher
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@rneher rneher commented Jul 12, 2024

This PR adds different time resolutions to RSV builds, currently

  • all-time
  • 6y
  • 3y

This is implemented by having one dense sample in the recent past, and adding 10% additional genomes before the cut-off. The latter is important for stability of the rooting and outlier filtering etc.

after merge, we need to adjust the manifest and the redirects.

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rneher commented Jul 12, 2024

Fixed the CI by updating the example data.

@rneher rneher requested a review from a team July 12, 2024 20:40
@rneher rneher merged commit 61a4a5d into master Jul 16, 2024
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@rneher rneher deleted the rsv-revamp branch July 16, 2024 19:33
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2 participants