GE Slice Timing From Protocol Data Block (rordenlab/dcm2niix#311)

neurolabusc · Jul 19, 2019 · de8008b · de8008b
1 parent 3830f57
commit de8008b
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Showing 8 changed files with 72 additions and 8 deletions.
diff --git a/Ref/Axial_EPI-FMRI_(Interleaved_I_to_S)_4.json b/Ref/Axial_EPI-FMRI_(Interleaved_I_to_S)_4.json
@@ -35,6 +35,22 @@
 	"TotalReadoutTime": 0.024444,
 	"PixelBandwidth": 7812.5,
 	"PhaseEncodingDirection": "j-",
+	"SliceTiming": [
+		0,
+		2.66667,
+		0.333333,
+		3,
+		0.666667,
+		3.33333,
+		1,
+		3.66667,
+		1.33333,
+		4,
+		1.66667,
+		4.33333,
+		2,
+		4.66667,
+		2.33333	],
 	"ImageOrientationPatientDICOM": [
 		1,
 		-0,
@@ -44,5 +60,5 @@
 		0	],
 	"InPlanePhaseEncodingDirectionDICOM": "COL",
 	"ConversionSoftware": "dcm2niix",
-	"ConversionSoftwareVersion": "v1.0.20190308  GCC8.2.0"
+	"ConversionSoftwareVersion": "v1.0.20190719  (JP2:OpenJPEG) (JP-LS:CharLS) Clang10.0.0"
 }
diff --git a/Ref/Axial_EPI-FMRI_(Interleaved_S_to_I)_6.json b/Ref/Axial_EPI-FMRI_(Interleaved_S_to_I)_6.json
@@ -35,6 +35,22 @@
 	"TotalReadoutTime": 0.024444,
 	"PixelBandwidth": 7812.5,
 	"PhaseEncodingDirection": "j-",
+	"SliceTiming": [
+		2.33333,
+		4.66667,
+		2,
+		4.33333,
+		1.66667,
+		4,
+		1.33333,
+		3.66667,
+		1,
+		3.33333,
+		0.666667,
+		3,
+		0.333333,
+		2.66667,
+		0	],
 	"ImageOrientationPatientDICOM": [
 		1,
 		-0,
@@ -44,5 +60,5 @@
 		0	],
 	"InPlanePhaseEncodingDirectionDICOM": "COL",
 	"ConversionSoftware": "dcm2niix",
-	"ConversionSoftwareVersion": "v1.0.20190308  GCC8.2.0"
+	"ConversionSoftwareVersion": "v1.0.20190719  (JP2:OpenJPEG) (JP-LS:CharLS) Clang10.0.0"
 }
diff --git a/Ref/Axial_EPI-FMRI_(Sequential_I_to_S)_5.json b/Ref/Axial_EPI-FMRI_(Sequential_I_to_S)_5.json
@@ -35,6 +35,22 @@
 	"TotalReadoutTime": 0.024444,
 	"PixelBandwidth": 7812.5,
 	"PhaseEncodingDirection": "j-",
+	"SliceTiming": [
+		0,
+		0.333333,
+		0.666667,
+		1,
+		1.33333,
+		1.66667,
+		2,
+		2.33333,
+		2.66667,
+		3,
+		3.33333,
+		3.66667,
+		4,
+		4.33333,
+		4.66667	],
 	"ImageOrientationPatientDICOM": [
 		1,
 		-0,
@@ -44,5 +60,5 @@
 		0	],
 	"InPlanePhaseEncodingDirectionDICOM": "COL",
 	"ConversionSoftware": "dcm2niix",
-	"ConversionSoftwareVersion": "v1.0.20190308  GCC8.2.0"
+	"ConversionSoftwareVersion": "v1.0.20190719  (JP2:OpenJPEG) (JP-LS:CharLS) Clang10.0.0"
 }
diff --git a/Ref/Axial_EPI-FMRI_(Sequential_S_to_I)_7.json b/Ref/Axial_EPI-FMRI_(Sequential_S_to_I)_7.json
@@ -35,6 +35,22 @@
 	"TotalReadoutTime": 0.024444,
 	"PixelBandwidth": 7812.5,
 	"PhaseEncodingDirection": "j-",
+	"SliceTiming": [
+		4.66667,
+		4.33333,
+		4,
+		3.66667,
+		3.33333,
+		3,
+		2.66667,
+		2.33333,
+		2,
+		1.66667,
+		1.33333,
+		1,
+		0.666667,
+		0.333333,
+		0	],
 	"ImageOrientationPatientDICOM": [
 		1,
 		-0,
@@ -44,5 +60,5 @@
 		0	],
 	"InPlanePhaseEncodingDirectionDICOM": "COL",
 	"ConversionSoftware": "dcm2niix",
-	"ConversionSoftwareVersion": "v1.0.20190308  GCC8.2.0"
+	"ConversionSoftwareVersion": "v1.0.20190719  (JP2:OpenJPEG) (JP-LS:CharLS) Clang10.0.0"
 }
diff --git a/Ref/EPI_PE=AP_3.json b/Ref/EPI_PE=AP_3.json
@@ -75,5 +75,5 @@
 		0	],
 	"InPlanePhaseEncodingDirectionDICOM": "COL",
 	"ConversionSoftware": "dcm2niix",
-	"ConversionSoftwareVersion": "v1.0.20190308  GCC8.2.0"
+	"ConversionSoftwareVersion": "v1.0.20190719  (JP2:OpenJPEG) (JP-LS:CharLS) Clang10.0.0"
 }
diff --git a/Ref/EPI_PE=LR_6.json b/Ref/EPI_PE=LR_6.json
@@ -75,5 +75,5 @@
 		0	],
 	"InPlanePhaseEncodingDirectionDICOM": "ROW",
 	"ConversionSoftware": "dcm2niix",
-	"ConversionSoftwareVersion": "v1.0.20190308  GCC8.2.0"
+	"ConversionSoftwareVersion": "v1.0.20190719  (JP2:OpenJPEG) (JP-LS:CharLS) Clang10.0.0"
 }
diff --git a/Ref/EPI_PE=PA_4.json b/Ref/EPI_PE=PA_4.json
@@ -75,5 +75,5 @@
 		0	],
 	"InPlanePhaseEncodingDirectionDICOM": "COL",
 	"ConversionSoftware": "dcm2niix",
-	"ConversionSoftwareVersion": "v1.0.20190308  GCC8.2.0"
+	"ConversionSoftwareVersion": "v1.0.20190719  (JP2:OpenJPEG) (JP-LS:CharLS) Clang10.0.0"
 }
diff --git a/Ref/EPI_PE=RL_5.json b/Ref/EPI_PE=RL_5.json
@@ -75,5 +75,5 @@
 		0	],
 	"InPlanePhaseEncodingDirectionDICOM": "ROW",
 	"ConversionSoftware": "dcm2niix",
-	"ConversionSoftwareVersion": "v1.0.20190308  GCC8.2.0"
+	"ConversionSoftwareVersion": "v1.0.20190719  (JP2:OpenJPEG) (JP-LS:CharLS) Clang10.0.0"
 }