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Upload files one by one

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Xuan Mai PHAM edited this page May 25, 2023 · 1 revision

If you only have a few files (up to 400MB by file) to upload, you may simply upload them one by one:

  • Click on the required project (remember you can search project by name)

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  • Click on Files

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  • Click on "Upload File"

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  • Select files to upload

  • You have the option of uploading zipped (archived) files and extracting them

  • There is a memory limit of 400 MB per file - if you exceed this, jump to the following section to use SFTP server

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  • Repeat the upload procedure for each file
  • Continue until all files have been uploaded to the project

Questions or Issues?

For any questions or issues related to the registration process for accessing the UK Biobank data through the McGill agreement, please contact the NeuroHub team by email at support@neurohub.ca.

For any questions or issues specifically related to accessing the NeuroHub portal or using any of the NeuroHub features and functionalities, please contact the NeuroHub team by email at support@neurohub.ca.

Table of Contents

1. Getting started

  1. Get a NeuroHub account
  2. Obtain UKBiobank access

2. Using NeuroHub

  1. Available Tools and Datasets
  2. Access NeuroHub
  3. Creating a project
  4. LORIS Data Query TooL(DQT)
  5. Jupyter Notebooks in NeuroHub
  6. Messaging in NeuroHub
  7. Accessing the Canadian Open Neuroscience Platform(CONP) datasets
  8. Accessing the HCP(Human Connectome Project) datasets
  9. Accessing the UK Biobank dataset
  10. Accessing the ABCD dataset
  11. Accessing the OpenNeuro dataset

3. Examples

  1. Analyses of structural data
  2. Cellranger Count
  3. scrNAbox
  4. BraTSPipeline

4. Supplementary Information

5. Direct access to the UK Biobank data

  1. Available Data
  2. An example of extracting ICD codes from UK Biobank tabular data
  3. Accessing Imaging Data
  4. Processing Data directly on Beluga

6. NeuroHub and Machine Learning

7. Acknowledging NeuroHub

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