pytests for output paths mcorr, cnmf, cnmfe #10
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kushalkolar
reviewed
May 18, 2022
tests/test_core.py
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| ) == \ | ||
| vid_dir.joinpath( | ||
| f'{df.iloc[-1]["uuid"]}-mcorr_els__d1_60_d2_80_d3_1_order_F_frames_2000_.mmap') | ||
| # assert vid_dir.joinpath(df.iloc[-1]['outputs']['mcorr-output-path'] |
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remove these commented lines
kushalkolar
reviewed
May 18, 2022
tests/test_core.py
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| assert vid_dir.joinpath(df.iloc[-1]['outputs']['mean-projection-path']) == \ | ||
| get_full_data_path(df.iloc[-1]['outputs']['mean-projection-path']) == \ | ||
| vid_dir.joinpath( | ||
| f'{df.iloc[-1]["uuid"]}_mean.npy') |
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append projection, so _mean_projection.npy
tests/test_core.py
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| assert vid_dir.joinpath(df.iloc[-1]['outputs']['std-projection-path']) == \ | ||
| get_full_data_path(df.iloc[-1]['outputs']['std-projection-path']) == \ | ||
| vid_dir.joinpath( | ||
| f'{df.iloc[-1]["uuid"]}_std.npy') |
tests/test_core.py
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| assert vid_dir.joinpath(df.iloc[-1]['outputs']['max-projection-path']) == \ | ||
| get_full_data_path(df.iloc[-1]['outputs']['max-projection-path']) == \ | ||
| vid_dir.joinpath( | ||
| f'{df.iloc[-1]["uuid"]}_max.npy') |
|
line 384 change: to: |
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pytests for checking file output paths cnmfe, mcorr, and cnmf
have not finished cnmfe