Merge pull request #136 from neherlab/docs/update-readme #45
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| on: | |
| push: | |
| branches: [ 'master', 'release-pypangraph' ] | |
| pull_request: | |
| paths: | |
| - packages/pypangraph/** | |
| - .github/workflows/pypangraph.yml | |
| repository_dispatch: | |
| types: build | |
| workflow_dispatch: | |
| workflow_call: | |
| concurrency: | |
| group: pypangraph-${{ github.workflow }}-${{ github.ref_type }}-${{ github.event.pull_request.number || github.ref || github.run_id }} | |
| cancel-in-progress: true | |
| defaults: | |
| run: | |
| shell: bash -euo pipefail {0} | |
| env: | |
| GITHUB_REPOSITORY_URL: ${{ github.server_url }}/${{ github.repository }} | |
| jobs: | |
| build: | |
| name: "Build PyPangraph (${{ matrix.python-version }})" | |
| runs-on: ubuntu-24.04 | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| python-version: [ "3.9", "3.10", "3.11", "3.12" ] | |
| steps: | |
| - name: "Checkout code" | |
| uses: actions/checkout@v4 | |
| with: | |
| fetch-depth: 1 | |
| submodules: true | |
| lfs: true | |
| - name: "Set up Python ${{ matrix.python-version }}" | |
| uses: actions/setup-python@v3 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: "Install dependencies" | |
| run: | | |
| cd packages/pypangraph | |
| python -m pip install --upgrade pip | |
| python -m pip install flake8 pytest | |
| python -m pip install . | |
| if [ -f requirements.txt ]; then pip install -r requirements.txt; fi | |
| - name: "Lint" | |
| run: | | |
| cd packages/pypangraph | |
| # stop the build if there are Python syntax errors or undefined names | |
| flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics | |
| # exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide | |
| flake8 . --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics | |
| - name: "Test" | |
| run: | | |
| cd packages/pypangraph | |
| pytest | |
| publish-to-pypi: | |
| name: "Publish to PyPI" | |
| needs: [ build ] | |
| if: endsWith(github.ref, '/release-pypangraph') | |
| runs-on: ubuntu-24.04 | |
| environment: | |
| name: ${{ github.ref }} | |
| steps: | |
| - name: "Checkout code" | |
| uses: actions/checkout@v4 | |
| with: | |
| fetch-depth: 1 | |
| submodules: true | |
| lfs: true | |
| - name: "Setup Python" | |
| uses: actions/setup-python@v3 | |
| with: | |
| python-version: '3.x' | |
| - name: "Install dependencies" | |
| run: | | |
| python -m pip install --upgrade pip | |
| python -m pip install build twine | |
| - name: "Build package" | |
| run: | | |
| cd packages/pypangraph | |
| python -m build | |
| - name: "Publish package" | |
| env: | |
| TWINE_USERNAME: __token__ | |
| TWINE_PASSWORD: ${{ secrets.NEHERLAB_BOT_PYPI_TOKEN }} | |
| run: | | |
| twine upload --non-interactive packages/pypangraph/dist/* | |
| - name: "Create git tag" | |
| run: | | |
| mkdir -p ${HOME}/bin | |
| export PATH="${PATH}:${HOME}/bin" | |
| curl -fsSL "https://github.com/TomWright/dasel/releases/download/v2.8.1/dasel_linux_amd64" -o "${HOME}/bin/dasel" && chmod +x "${HOME}/bin/dasel" | |
| git config --global user.name "${{ secrets.NEHERLAB_BOT_GITHUB_NAME }}" | |
| git config --global user.email "${{ secrets.NEHERLAB_BOT_GITHUB_EMAIL }}" | |
| version=$(dasel select -r toml -w - -s ".package.version" -f "packages/pypangraph/pyproject.toml") | |
| git tag "pypangraph-${version}" | |
| git push origin "pypangraph-${version}" |