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Created new dataset North Uganda 2020 #943

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Created new dataset North Uganda 2020

Created new dataset North Uganda 2020 #943

Workflow file for this run

.github/workflows/test.yml at 0731600
name: Test
on:
pull_request:
branches: [ master ]
jobs:
unit-tests:
runs-on: ubuntu-latest
defaults:
run:
shell: bash -l {0}
steps:
- uses: actions/checkout@v2
with:
ref: ${{ github.event.pull_request.head.ref }}
- name: Setup environment
uses: mamba-org/setup-micromamba@v1
with:
environment-file: environment-dev.yml
environment-name: landcover-mapping
cache-environment: true
- name: Run unit tests
run: python -m unittest
dataset-tests:
runs-on: ubuntu-latest
needs: unit-tests
defaults:
run:
shell: bash -l {0}
steps:
- uses: actions/checkout@v2
with:
ref: ${{ github.event.pull_request.head.ref }}
- name: Setup environment
uses: mamba-org/setup-micromamba@v1
with:
environment-file: environment-dev.yml
environment-name: landcover-mapping
cache-environment: true
- uses: google-github-actions/auth@v0
with:
credentials_json: ${{ secrets.GCP_SA_KEY }}
- uses: google-github-actions/setup-gcloud@v0
- name: Pull datasets
env:
GCP_SA_KEY: ${{ secrets.GCP_SA_KEY }}
run: dvc pull data/raw data/datasets -f
- name: Integration test - Data integrity
run: |
openmapflow cp templates/integration_test_datasets.py .
python -m unittest integration_test_datasets.py
model-tests:
runs-on: ubuntu-latest
needs: unit-tests
defaults:
run:
shell: bash -l {0}
steps:
- uses: actions/checkout@v2
with:
ref: ${{ github.event.pull_request.head.ref }}
- name: Setup environment
uses: mamba-org/setup-micromamba@v1
with:
environment-file: environment-dev.yml
environment-name: landcover-mapping
cache-environment: true
- uses: google-github-actions/auth@v0
with:
credentials_json: ${{ secrets.GCP_SA_KEY }}
- name: Set up Cloud SDK
uses: google-github-actions/setup-gcloud@v0
- name: Pull datasets and models
env:
GCP_SA_KEY: ${{ secrets.GCP_SA_KEY }}
run: dvc pull data/datasets data/models -f
- name: Integration test - Train and evaluate
run: |
openmapflow cp templates/integration_test_train_evaluate.py .
python -m unittest integration_test_train_evaluate.py
- name: Integration test - Model bboxes match evaluation sets
run: python -m unittest test/integration_test_model_bbox.py
- name: Integration test - Model results are consistent
run: python -m unittest test/integration_test_model_evaluation.py
area-tests:
runs-on: ubuntu-latest
needs: unit-tests
defaults:
run:
shell: bash -l {0}
steps:
- uses: actions/checkout@v2
with:
ref: ${{ github.event.pull_request.head.ref }}
- name: Setup environment
uses: mamba-org/setup-micromamba@v1
with:
environment-file: environment-dev.yml
environment-name: landcover-mapping
cache-environment: true
- name: Install seaborn
run: pip install seaborn
- uses: google-github-actions/auth@v0
with:
credentials_json: ${{ secrets.GCP_SA_KEY }}
- uses: google-github-actions/setup-gcloud@v0
- name: Pull test area data
env:
GCP_SA_KEY: ${{ secrets.GCP_SA_KEY }}
run: dvc pull data/test_area
- name: Integration test - Area
run: python -m unittest test/integration_test_area.py
project-tests:
runs-on: ubuntu-latest
needs: unit-tests
defaults:
run:
shell: bash -l {0}
steps:
- uses: actions/checkout@v2
with:
ref: ${{ github.event.pull_request.head.ref }}
- name: Setup environment
uses: mamba-org/setup-micromamba@v1
with:
environment-file: environment-dev.yml
environment-name: landcover-mapping
cache-environment: true
- uses: google-github-actions/auth@v0
with:
credentials_json: ${{ secrets.GCP_SA_KEY }}
- uses: google-github-actions/setup-gcloud@v0
- name: Pull all data
env:
GCP_SA_KEY: ${{ secrets.GCP_SA_KEY }}
run: dvc pull -f
- name: Integration test - Project
run: |
openmapflow cp templates/integration_test_project.py .
python -m unittest integration_test_project.py