Update Snyk dependencies for documentation pip requirements.

nasa · Oct 30, 2023 · 53c87f4 · 53c87f4
1 parent 854522e
commit 53c87f4
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Showing 2 changed files with 22 additions and 25 deletions.
diff --git a/examples/job_stac.ipynb b/examples/job_stac.ipynb
@@ -16,12 +16,13 @@
    "source": [
     "import sys\n",
     "sys.path.append('..')\n",
+    "\n",
     "!{sys.executable} -m pip install -q -r ../requirements/examples.txt\n",
     "\n",
     "# Install harmony-py requirements.  Not necessary if you ran `pip install harmony-py` in your kernel  \n",
     "!{sys.executable} -m pip install -q -r ../requirements/core.txt\n",
     "\n",
-    "from harmony import BBox, Client, Collection, Request, Environment\n"
+    "from harmony import BBox, Client, Collection, Request, Environment"
    ]
   },
   {
@@ -37,7 +38,7 @@
    "metadata": {},
    "outputs": [],
    "source": [
-    "    harmony_client = Client(env=Environment.UAT)  # assumes .netrc usage\n",
+    "harmony_client = Client(env=Environment.UAT)  # assumes .netrc usage\n",
     "\n",
     "collection = Collection(id='C1234088182-EEDTEST')\n",
     "request = Request(\n",
@@ -47,7 +48,7 @@
     ")\n",
     "\n",
     "job_id = harmony_client.submit(request)\n",
-    "job_id\n"
+    "job_id"
    ]
   },
   {
@@ -63,7 +64,7 @@
    "metadata": {},
    "outputs": [],
    "source": [
-    "stac_catalog_url = harmony_client.stac_catalog_url(job_id, show_progress=True)\n"
+    "stac_catalog_url = harmony_client.stac_catalog_url(job_id, show_progress=True)"
    ]
   },
   {
@@ -81,16 +82,17 @@
    "source": [
     "from urllib.parse import urlparse\n",
     "import requests\n",
-    "from pystac import STAC_IO\n",
+    "from pystac import stac_io\n",
+    "\n",
     "\n",
     "def requests_read_method(uri):\n",
     "    parsed = urlparse(uri)\n",
     "    if parsed.hostname.startswith('harmony.') or parsed.hostname.startswith('localhost'):\n",
     "        return harmony_client.read_text(uri)\n",
     "    else:\n",
-    "        return STAC_IO.default_read_text_method(uri)\n",
+    "        return stac_io.default_read_text_method(uri)\n",
     "\n",
-    "STAC_IO.read_text_method = requests_read_method"
+    "stac_io.read_text_method = requests_read_method"
    ]
   },
   {
@@ -107,19 +109,14 @@
    "outputs": [],
    "source": [
     "from pystac import Catalog\n",
-    "cat = Catalog.from_file(stac_catalog_url)\n",
     "\n",
+    "\n",
+    "cat = Catalog.from_file(stac_catalog_url)\n",
     "print(cat.title)\n",
+    "\n",
     "for item in cat.get_all_items():\n",
     "    print(item.datetime, item.properties.get('expires'), [asset.href for asset in item.assets.values()])"
    ]
-  },
-  {
-   "cell_type": "code",
-   "execution_count": null,
-   "metadata": {},
-   "outputs": [],
-   "source": []
   }
  ],
  "metadata": {
@@ -138,7 +135,7 @@
    "name": "python",
    "nbconvert_exporter": "python",
    "pygments_lexer": "ipython3",
-   "version": "3.11.2"
+   "version": "3.10.13"
   }
  },
  "nbformat": 4,

diff --git a/requirements/examples.txt b/requirements/examples.txt
@@ -1,10 +1,10 @@
-boto3 ~= 1.17
-ipyplot ~= 1.1
-ipywidgets ~= 7.6
-jupyterlab ~= 3.0
-matplotlib ~= 3.3
-pystac ~= 1.7.3
-rasterio ~= 1.2
+boto3 ~= 1.28
 intake-stac ~= 0.4.0
-netCDF4
-numpy
+ipyplot ~= 1.1
+ipywidgets ~= 8.1
+jupyterlab ~= 4.0
+matplotlib ~= 3.8
+netCDF4 ~= 1.6
+numpy ~= 1.26
+pystac ~= 1.9.0
+rasterio ~= 1.3