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fix for change to how we deal with first / surname
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cm401 committed Sep 6, 2024
1 parent be0ae32 commit d4fb6de
Showing 1 changed file with 2 additions and 8 deletions.
10 changes: 2 additions & 8 deletions src/sars_world_map/orderly.R
Original file line number Diff line number Diff line change
Expand Up @@ -36,18 +36,12 @@ articles <- read_csv("articles.csv")
models <- read_csv("models.csv")
parameters <- read_csv("parameters.csv")

# to save down for epireview use plotting = FALSE
dfs <- data_curation(articles,tibble(),models,parameters, plotting = FALSE, switch_first_surname = TRUE )

articles <- dfs$articles
models <- dfs$models
parameters <- dfs$parameters

write_csv(articles,'sars_articles.csv')
write_csv(models,'sars_models.csv')
write_csv(parameters,'sars_parameters.csv')

dfs <- data_curation(articles,tibble(),models,parameters, plotting = TRUE, switch_first_surname = TRUE )
# to save down for epireview use plotting = FALSE
dfs <- data_curation(articles,tibble(),models,parameters, plotting = FALSE)

articles <- dfs$articles
models <- dfs$models
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