I have trouble with retriving sequences after assembling (file xxx_chimera_check_performed.txt not found)

[WASD0515]

I have assembled my data successfully, but when I try to extract sequences from assemble results, it gave out such error:

Traceback (most recent call last):
File "/nfs/guwei/conda/Conda3/envs/hybpiper/bin/hybpiper", line 10, in
sys.exit(main())
^^^^^^
File "/nfs/guwei/conda/Conda3/envs/hybpiper/lib/python3.12/site-packages/hybpiper/hybpiper_main.py", line 322, in main
args.func(args)
File "/nfs/guwei/conda/Conda3/envs/hybpiper/lib/python3.12/site-packages/hybpiper/hybpiper_main.py", line 154, in retrieve_sequences_main
retrieve_sequences.main(args)
File "/nfs/guwei/conda/Conda3/envs/hybpiper/lib/python3.12/site-packages/hybpiper/retrieve_sequences.py", line 501, in main
recover_sequences_from_all_samples(seq_dir,
File "/nfs/guwei/conda/Conda3/envs/hybpiper/lib/python3.12/site-packages/hybpiper/retrieve_sequences.py", line 203, in recover_sequences_from_all_samples
with open(f'{sampledir}/{sample}/{sample}_chimera_check_performed.txt', 'r') as chimera_check_handle:
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
FileNotFoundError: [Errno 2] No such file or directory: './CRR514103/CRR514103_chimera_check_performed.txt'

However, the heatmap shown that my assemble result is not empty

Here is my result folder:

Interestingly, my colleague used an earlier version of Hybpiper (2.0.1rc build 13), copyed my result folders to his path, and successfully retrived genes without any error warings, it is very strange.

Thanks!

[WASD0515]

When I rolled back Hybpiper to version 2.1.1 using conda, the issue was resolved, but I am still curious and uneasy about this bug appeared in version 2.2