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mohsenh17/README.md

Hi there, I'm Mohsen Hosseini 👋

Data Scientist | AI Researcher | Deep Learning Specialist

📍 Based in Waterloo, Ontario, Canada

🔬 About Me

I'm a data scientist and scholar with a PhD in Computer Science from Western University. My research intersects deep learning, natural language processing (NLP), and bioinformatics, focusing on leveraging large language models (LLMs) for real-world applications.

🧠 Research & Technical Expertise

  • Deep Learning Frameworks: TensorFlow, PyTorch, JAX/FLAX, Hugging Face, Keras
  • NLP & LLM Integration: Retrieval-Augmented Generation (RAG), LangChain
  • Cloud & HPC: AWS, Docker, Apptainer, SLURM
  • Programming Languages: Python, C, C++, Java
  • Data Science Tools: NumPy, Pandas, Scikit-Learn, Matplotlib, PySpark, SQL
  • Web Development: Flask, Celery, Redis

🧾 Education

  • PhD in Computer Science, Western University (2020–2024)

    • Thesis: "Protein-protein interaction prediction using Large Language Models"
    • Awards: Western Graduate Research Scholarship, Full Funding Recipient

  • MSc in Computer Science, University of Tehran (2017–2020)

    • Thesis: "Neural Network Approaches for Top-N Recommender Systems"
    • Awards: Full Funding Recipient

GitHub Stats Top Languages

🔗 Explore my repositories below to see my work in deep learning, NLP, and bioinformatics.

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  1. TransformerNNX TransformerNNX Public

    A transformer model in flax.nnx

    Python 4 1

  2. RAGit RAGit Public

    A RAG system to answer questions about any codebase and write pr and commit messages based on the changes of the branch

    Python

  3. lucian-ilie/C3PI lucian-ilie/C3PI Public

    Python 2

  4. jaxLearning jaxLearning Public

    Jupyter Notebook

  5. lucian-ilie/Seq-InSite lucian-ilie/Seq-InSite Public

    Seq-InSite: sequence supersedes structure for protein interaction site prediction

    Python 2 1

  6. aminoClust aminoClust Public

    Unsupervised clustering of amino acids using VQ-VAE on transformer-based protein embeddings.

    Python