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change default for info to use for inverse #905 #919

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merged 22 commits into from
Apr 2, 2024

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@SophieHerbst SophieHerbst commented Apr 2, 2024

Change default for info given to 05_make_inverse.py (and for consistency 04_make_forward.py):
If set to None (default), the info will be retrieved either from the raw
file specified in noise_cov, or the cleaned epochs (if noise_cov is None or ad-hoc).

Closes #905

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Nice, just some minor cleanups!

mne_bids_pipeline/_config.py Show resolved Hide resolved
mne_bids_pipeline/steps/source/_04_make_forward.py Outdated Show resolved Hide resolved
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SophieHerbst and others added 6 commits April 2, 2024 17:37
Co-authored-by: Eric Larson <larson.eric.d@gmail.com>
Co-authored-by: Eric Larson <larson.eric.d@gmail.com>
Co-authored-by: Eric Larson <larson.eric.d@gmail.com>
Co-authored-by: Eric Larson <larson.eric.d@gmail.com>
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Marking for merge-when-green, thanks in advance @SophieHerbst !

@larsoner larsoner enabled auto-merge (squash) April 2, 2024 16:16
@larsoner larsoner merged commit cbeeb98 into mne-tools:main Apr 2, 2024
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larsoner added a commit to larsoner/mne-bids-pipeline that referenced this pull request Apr 16, 2024
* upstream/main:
  change default for info to use for inverse mne-tools#905 (mne-tools#919)
  Improve documentation and config validation of `loose` and `depth` parameters; drop support for `loose=None` (mne-tools#915)
  enhance documentation of caching, continuation of mne-tools#914 (mne-tools#918)
  [pre-commit.ci] pre-commit autoupdate (mne-tools#917)
  Restructure configuration options documentation sections (mne-tools#914)
  Try to fix documentation deployment (mne-tools#913)
  Do not show `Annotated` types in configuration options documentation (mne-tools#911)
  Add number of subjects to grand-average report (cont'd) (mne-tools#910)
  MAINT: Ensure input changes cause output changes (mne-tools#904)
  Render type annotations in the documentation again (mne-tools#909)
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STC saturated – rank problem?
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