fix typo in test data

miRTop · Jun 19, 2019 · a95af82 · a95af82
1 parent b9f8e84
commit a95af82
Showing 1 changed file with 2 additions and 2 deletions.
diff --git a/test/test_automated_analysis.py b/test/test_automated_analysis.py
@@ -389,11 +389,11 @@ def test_count(self):
         """
         with make_workdir():
             clcode = ["mirtop",
-                      "count",
+                      "counts",
                       "-o", "test_out_mirs",
                       "--hairpin", "../../data/examples/annotate/hairpin.fa",
                       "--gtf", "../../data/examples/annotate/hsa.gff3",
-                      "../../data/examples/synthetic/let7a-5p.gtf"]
+                      "--gff", "../../data/examples/synthetic/let7a-5p.gff"]
             print("")
             print(" ".join(clcode))
             subprocess.check_call(clcode)