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superfocus_downloadDB #65

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linsalrob opened this issue Aug 6, 2020 · 0 comments
Closed

superfocus_downloadDB #65

linsalrob opened this issue Aug 6, 2020 · 0 comments

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@linsalrob
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After a conda install and then downloading the databases, the command superfocus_downloadDB -a diamond -i clusters/ fails because the output directory (Error: Error opening file in my case $HOME/anaconda3/envs/superfocus/lib/python3.8/site-packages/superfocus_app/db/static/diamond/`) does not exist.

I think superfocus_downloadDB should just make the output directories for the aligner before the call to make the databases.
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@metageni @linsalrob