Prediction of new c_AMPs, from the prediction of sORF to the getting c_AMPs. Scripts.
Trained predictive model.Models.
Test set data under 50AA in length, and also the benchmark dataset.Dataset.
Verified AMPs have been deposited and published in ADP database.
For sequences that have been predicted but not yet verified, please contact Jun Wang(junwang@im.ac.cn) and request a Material Transfer Agreement (MTA) to ensure proper usage.
Download and copy bert_sklearn to your python3 site-packages folder.
cd bert-sklearn
pip install .Please cite: Identification of antimicrobial peptides from the human gut microbiome using deep learning