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Releases: maxdoblas/QuickEd

v1.1

21 Aug 14:35
@ThePituLegend ThePituLegend
v1.1-fix
b4f6944
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v1.1 Latest
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What's Changed

  • New vectorized implementation of the BandEd BPM using AVX2 (by @criniguez).
  • This new version achieves up to 2.8x speedup w.r.t. v1.0.

Full Changelog: v1.0...v1.1

Precompiled binaries

We offer pre-compiled versions of QuickEd tools (generate-dataset and align-benchmark) for x86-64, both with and without SSE4.1+AVX2.
If this configuration is incompatible with your environment, please compile your own binaries.

Contributors

criniguez
Assets 6
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Initial Release - v1.0

25 Jul 14:09
@ThePituLegend ThePituLegend
v1.0
bb4efb3
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ThePituLegend Oscar Lostes Cazorla
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Initial Release - v1.0

QuickEd is a high-performance exact sequence alignment based on the bound-and-align paradigm.

Precompiled binaries

We offer pre-compiled versions of QuickEd tools (generate-dataset and align-benchmark) for x86-64+SSE4.1, to fully exploit the capabilities of the library.
If this configuration is incompatible with your environment, please compile your own binaries.

Authors: - @maxdoblas - @ThePituLegend - @quim0 - @criniguez - @mmoreto - @smarco

Contributors

mmoreto, smarco, and 4 other contributors
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