0.5.0

Release notes for brendapy 0.5.0

We are pleased to release the next version of brendapy.
This release now supports BRENDA 2022.1 including 76 new and 428 updated enzyme classes.

Features

• updated release notes
• Fix #49, updated logo
• LICENSE added
• Fix #42 zenodo JSON updated
• Fix #40 test folder refactored
• Fix #44 github actions integration
• Fix #52 updated python dependencies
• Fix #46 code base formatted with black
• Fix #41, renamed master branch to main
• Fix #51, refactored README.rst
• Fix #43, python 3.10 support & updated python version documentation
• Fix #45, code coverage reports
• Fix #57, update of resources to BRENDA 2022.1 and latest BTO, ChEBI and NCBI taxonomy
• Fix #48, flake8 issues fixed
• Fix #55, replaced format strings with fstrings
• Fix #54, replaced os.path with pathlib
• Fix #58, rich logging
• Fix #56, updated owl parsing
• Additional tests
• Refactored download of resources with progress bar
• Fix #39, updated resources host

Your brendapy team

brendapy-v0.4.1 - BRENDA in python

0.4.1

• downloading online resources in stead of pypi packaging

brendapy-v0.4.0 - BRENDA in python

0.4.0

Major release with many bug fixes and new features.

• resolving uniprot and swissprot information
• removing redundant information
• fixing references in entries
• mapping to BRENDA tissue ontology (BTO)
• mapping to chebi ontology
• bugfixes (encoding issues, organism parsing, taxonomy, ...)
• removing git-lfs dependencies

brendapy-v0.3.0 - BRENDA in python

Release notes

0.3.0

• taxonomy information added
• parsing of all BRENDA fields
• extracting values and substrates for kinetic parameters
• multitude of bug-fixes (e.g., correct references, species, ...)
• testing of all examples

brendapy-v0.2.0 - BRENDA in python

Merge pull request #7 from matthiaskoenig/develop

changes for v0.2.0

brendapy-v0.1.1 - BRENDA in python

v0.1.2

version bump

brendapy-v0.1.1 - BRENDA in python

Merge branch 'master' into develop

brendapy-v0.1.0 - BRENDA in python

Initial release from updated legacy code.