Bump pypa/gh-action-pypi-publish from 1.10.2 to 1.11.0 #523
Workflow file for this run
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name: GitHub CI | |
on: [push, pull_request] | |
concurrency: | |
group: ${{ github.workflow }}-${{ github.event.pull_request.number || github.ref || github.run_id }} | |
cancel-in-progress: true | |
jobs: | |
build: | |
name: On ${{ matrix.os }} with (${{ matrix.compiler }}, python-${{ matrix.python-version }}, numpy-${{ matrix.numpy-version }}) | |
runs-on: ${{ matrix.os }} | |
strategy: | |
fail-fast: false | |
matrix: | |
os: ["ubuntu-20.04", "ubuntu-latest", "macos-latest"] | |
compiler: [gcc-7, gcc-9, clang] | |
python-version: ["3.9", "3.12"] | |
numpy-version: ["1.20", "2.0.1"] | |
include: | |
- numpy-version: "1.23" | |
compiler: gcc-10 | |
python-version: "3.10" | |
os: ubuntu-latest | |
- numpy-version: "1.23" | |
compiler: gcc-11 | |
python-version: "3.10" | |
os: ubuntu-latest | |
- numpy-version: "1.23" | |
compiler: gcc-10 | |
python-version: "3.10" | |
os: ubuntu-latest | |
- numpy-version: "1.23" | |
compiler: gcc-11 | |
python-version: "3.10" | |
os: ubuntu-latest | |
- numpy-version: "1.23" | |
compiler: gcc-10 | |
python-version: "3.11" | |
os: ubuntu-latest | |
- numpy-version: "1.23" | |
compiler: gcc-11 | |
python-version: "3.11" | |
os: ubuntu-latest | |
- numpy-version: "1.23" | |
compiler: gcc-12 | |
python-version: "3.11" | |
os: ubuntu-latest | |
- numpy-version: "1.23" | |
compiler: gcc-10 | |
python-version: "3.11" | |
os: ubuntu-latest | |
- numpy-version: "1.23" | |
compiler: gcc-11 | |
python-version: "3.11" | |
os: ubuntu-latest | |
- numpy-version: "1.23" | |
compiler: gcc-12 | |
python-version: "3.11" | |
os: ubuntu-latest | |
exclude: | |
# Only run with 'clang' on OSX | |
- os: "macos-latest" | |
compiler: gcc-7 | |
- os: "macos-latest" | |
compiler: gcc-9 | |
# Don't use 'clang' on linux | |
- os: "ubuntu-20.04" | |
compiler: clang | |
- os: "ubuntu-latest" | |
compiler: clang | |
# only gcc-10 on latest | |
- os: "ubuntu-latest" | |
compiler: gcc-9 | |
- os: "ubuntu-latest" | |
compiler: gcc-7 | |
# Only use latest numpy on ubuntu-latest | |
- os: "ubuntu-latest" | |
numpy-version: 1.20 | |
# python3.10 only on ubuntu-latest | |
# - os: "ubuntu-20.04" | |
# python-version: "3.10" | |
# - os: "macos-latest" | |
# python-version: "3.10" | |
- python-version: "3.9" | |
numpy-version: "2.0.1" | |
- python-version: "3.12" | |
numpy-version: "1.20" | |
env: | |
CC: ${{ matrix.compiler }} | |
CORRFUNC_CI: true | |
steps: | |
- name: Checkout | |
uses: actions/checkout@v4 | |
- name: Setup Miniconda | |
uses: conda-incubator/setup-miniconda@v3 | |
with: | |
auto-update-conda: true | |
auto-activate-base: false | |
miniconda-version: 'latest' | |
python-version: ${{ matrix.python-version }} | |
# This was needed on 18.04 but not on 20.04 | |
# - name: Install binutils on linux | |
# shell: bash -l {0} | |
# if: matrix.os == 'ubuntu-18.04' | |
# run: | | |
# sudo apt-get update | |
# sudo apt-get install binutils | |
- name: Install gcc-7 on ubuntu-20.04 | |
shell: bash -l {0} | |
if: matrix.os == 'ubuntu-20.04' | |
run: | | |
sudo add-apt-repository ppa:ubuntu-toolchain-r/test | |
sudo apt-get update | |
sudo apt-get install gcc-7 | |
- name: Install dependencies | |
shell: bash -l {0} | |
run: | | |
conda create -q --yes -n test python=${{ matrix.python-version }} nomkl | |
conda activate test | |
conda install -q --yes -c conda-forge numpy=${{ matrix.numpy-version }} gsl | |
- name: Display PATH, compiler, python | |
shell: bash -l {0} | |
run: | | |
conda activate test | |
echo "PATH = " $PATH | |
echo "COMPILER = " `which ${{ matrix.compiler }}` | |
echo "COMPILER VERSION = " `${{ matrix.compiler }} --version` | |
echo "PYTHON = " `which python` | |
echo "(PYTHON, NUMPY) version = " `python -c "import sys; import numpy as np; print(sys.version); print(np.__version__);"` | |
echo "Preprocessor defs:" | |
echo `${{ matrix.compiler }} -dM -E - -march=native` | |
- name: lscpu on Linux | |
if: matrix.os != 'macos-latest' | |
run: | | |
lscpu | |
- name: sysctl machdep.cpu on OSX | |
if: matrix.os == 'macos-latest' | |
run: | | |
sysctl machdep.cpu | |
# - name: Add linker flag to OSX + gcc | |
# shell: bash -l {0} | |
# if: matrix.os == 'osx-latest' && startswith(matrix.compiler, 'gcc') | |
# run: export CLINK = '-lgomp' | |
- name: compile | |
shell: bash -l {0} | |
run: make -r CC=${{ matrix.compiler }} | |
- name: install | |
shell: bash -l {0} | |
run: make install CC=${{ matrix.compiler }} | |
- name: compile and install python extensions | |
shell: bash -l {0} | |
run: | | |
echo "CC = " $CC | |
export CC=${{ matrix.compiler }} | |
python -m pip install -e . | |
- name: tests | |
shell: bash -l {0} | |
run: make tests CC=${{ matrix.compiler }} | |
- name: doctests | |
shell: bash -l {0} | |
if: matrix.os == 'ubuntu-latest' && matrix.python-version == '3.10' && matrix.numpy-version == '1.16' | |
run: | | |
python -m pip install 'sphinx>=1.8' | |
make -C docs doctest | |
- name: Python tests | |
shell: bash -l {0} | |
run: | | |
python -m pip install pytest | |
python -m pytest -v |