Code

Issue 207#8

Code

Merged

lucventurini merged 8 commits intomasterlucventurini/mikado:masterfrom issue-207lucventurini/mikado:issue-207Copy head branch name to clipboardAug 15, 2019

+222-198

Commits

Commits on Aug 13, 2019

• Reduced the amount for starting pruning the graph. Also, now the first level of approximation kicks in *before* loading transcript data: that should speed things up as well.

  lucventurini

  committed
  983f086

Commits on Aug 14, 2019

• Fixing up small bugs introduced in previous commit

  lucventurini

  committed
  a966e68

• EI-CoreBioinformatics#207: now Mikado pick will delegate transcript creation and checking to the subprocesses. This should speed it up a lot in the presence of complex, long loci.

  lucventurini

  committed
  adff915

• Solved a bug in the submission of loci to the subprocesses

  lucventurini

  committed
  81056b2

Commits on Aug 15, 2019

• Now Mikado pick will exclude any transcript with an intron over the maximum length. This should prevent stray transcripts from botched prepare runs to take up too much time.

  lucventurini

  committed
  d2a6717

• Solved a couple of bugs in picker

  lucventurini

  committed
  57f8035

• Bugfix for 57f8035

  lucventurini

  committed
  f21dcf7

• Bugfix for f21dcf7 and 57f8035

  lucventurini

  committed
  538eeec