refactor get_config

loculus-project · Oct 8, 2024 · 8068810 · 8068810
1 parent e04dcb0
commit 8068810
Showing 1 changed file with 2 additions and 0 deletions.
diff --git a/preprocessing/nextclade/src/loculus_preprocessing/config.py b/preprocessing/nextclade/src/loculus_preprocessing/config.py
@@ -94,6 +94,8 @@ def get_config(config_file: str | None = None) -> Config:
     args = parser.parse_args()
 
     config = Config()
+    if not args.backend_host:  # Set here so we can use organism
+        config.backend_host = f"http://127.0.0.1:8079/{config.organism}"
 
     # Use first config file present in order of precedence
     config_file_path = (