added exception to _get_loss function #278
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# This workflow will install Python dependencies, run tests and report code coverage with a variety of Python versions | |
# For more information see: https://help.github.com/actions/language-and-framework-guides/using-python-with-github-actions | |
name: Unit test and code coverage | |
on: | |
push: | |
branches: [ main ] | |
pull_request: | |
branches: [ main ] | |
jobs: | |
build: | |
runs-on: ubuntu-latest | |
defaults: | |
run: | |
shell: bash -l {0} | |
steps: | |
- uses: actions/checkout@v3 | |
- uses: mamba-org/setup-micromamba@v1 | |
with: | |
create-args: >- | |
python=3.9.15 | |
environment-file: ci-environment.yml | |
- name: Install dependencies | |
run: | | |
sudo apt-get update | |
python -m pip install --upgrade pip | |
pip install . | |
pip install 'git+https://github.com/facebookresearch/detectron2.git@80307d2d5e06f06a8a677cc2653f23a4c56402ac' | |
pip install 'git+https://github.com/pmelchior/scarlet.git' | |
pip install .[dev] | |
- name: Run unit tests with pytest | |
run: | | |
python -m pytest tests --cov=deepdisc --cov-report=xml | |
- name: Upload coverage report to codecov | |
uses: codecov/codecov-action@v3 |