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minor changes to R version, readme to clarify which version is needed…
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…, update the package version to reflect changes.
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willtownes committed Apr 13, 2024
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4 changes: 2 additions & 2 deletions DESCRIPTION
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Package: scry
Title: Small-Count Analysis Methods for High-Dimensional Data
Version: 1.11.1
Version: 1.12.0
Description: Many modern biological datasets consist of small counts that are
not well fit by standard linear-Gaussian methods such as principal
component analysis. This package provides implementations of
Expand All @@ -18,7 +18,7 @@ Authors@R: c(person("Kelly", "Street", email = "street.kelly@gmail.com",
)
License: Artistic-2.0
Depends:
R (>= 4.0),
R (>= 4.3),
stats,
methods
Imports:
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6 changes: 6 additions & 0 deletions NEWS.md
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* Optional adjustment for categorical batch effects for all methods.
* Support for SingleCellExperiment and SummarizedExperiment objects
* Support for matrix and sparse Matrix objects.

# scry 1.12

* changed from Travis to Github actions
* #21 pull request from eweine to improve memory efficiency
* now requires R 4.3
5 changes: 4 additions & 1 deletion README.md
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Expand Up @@ -27,12 +27,15 @@ if (!requireNamespace("BiocManager", quietly=TRUE))
BiocManager::install("scry")
```

The Bioconductor release requires R version 4.0. If you prefer to use the older
The Bioconductor release requires the latest version of R. If you prefer to use the older
R 3.6, you can install from the unofficial r3 branch as follows:

```
remotes::install_github("kstreet13/scry@r3")
```

The r3 branch is not tested as regularly.


## Issues and bug reports
Please use https://github.com/kstreet13/scry/issues to submit issues, bug reports, and comments.

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