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Update remote-anndata.Rmd (#106)
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keller-mark committed Jul 26, 2024
1 parent efe90f7 commit f84355d
Showing 1 changed file with 2 additions and 2 deletions.
4 changes: 2 additions & 2 deletions vignettes/remote-anndata.Rmd
Original file line number Diff line number Diff line change
Expand Up @@ -23,7 +23,7 @@ BiocManager::install("Rarr")
library(pizzarr)

# The path to the root of the AnnData-Zarr store.
root <- "https://s3.amazonaws.com/vitessce-data/0.0.33/main/human-lymph-node-10x-visium/human_lymph_node_10x_visium.h5ad.zarr"
root <- "https://data-1.vitessce.io/0.0.33/main/human-lymph-node-10x-visium/human_lymph_node_10x_visium.h5ad.zarr"

# Open the AnnData-Zarr store as an HttpStore.
store <- HttpStore$new(root)
Expand All @@ -46,4 +46,4 @@ print(dim(index_arr))
# [1] 3861

plot(x=umap_arr[,1], y=umap_arr[,2], col=cluster_arr)
```
```

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